Protein–RNA interactions for Protein: Q08949

DDC1, DNA damage checkpoint protein 1, yeastyeast

Predictions only

Length 612 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DDC1Q08949 SSN3YPL042C 1668 nt9.6□□□□□ -0.87
DDC1Q08949 CPD1YGR247W 720 nt9.59□□□□□ -0.87
DDC1Q08949 ZRT3YKL175W 1512 nt9.57□□□□□ -0.88
DDC1Q08949 URA6YKL024C 615 nt9.57□□□□□ -0.88
DDC1Q08949 PHO23YNL097C 993 nt9.57□□□□□ -0.88
DDC1Q08949 PBP1YGR178C 2169 nt9.57□□□□□ -0.88
DDC1Q08949 BNI5YNL166C 1347 nt9.56□□□□□ -0.88
DDC1Q08949 YJL118WYJL118W 660 nt9.55□□□□□ -0.88
DDC1Q08949 LSB5YCL034W 1065 nt9.55□□□□□ -0.88
DDC1Q08949 SAM3YPL274W 1764 nt9.55□□□□□ -0.88
DDC1Q08949 MSC1YML128C 1542 nt9.54□□□□□ -0.88
DDC1Q08949 OYE3YPL171C 1203 nt9.53□□□□□ -0.88
DDC1Q08949 GAL3YDR009W 1563 nt9.52□□□□□ -0.89
DDC1Q08949 OXA1YER154W 1209 nt9.52□□□□□ -0.89
DDC1Q08949 NUC1YJL208C 990 nt9.52□□□□□ -0.89
DDC1Q08949 CCT5YJR064W 1689 nt9.51□□□□□ -0.89
DDC1Q08949 SEC61YLR378C 1443 nt9.51□□□□□ -0.89
DDC1Q08949 RPT5YOR117W 1305 nt9.51□□□□□ -0.89
DDC1Q08949 SAM2YDR502C 1155 nt9.49□□□□□ -0.89
DDC1Q08949 ESS1YJR017C 513 nt9.49□□□□□ -0.89
DDC1Q08949 CYT2YKL087C 675 nt9.47□□□□□ -0.89
DDC1Q08949 PET8YNL003C 855 nt9.47□□□□□ -0.89
DDC1Q08949 YJL067WYJL067W 351 nt9.46□□□□□ -0.9
DDC1Q08949 RIB7YBR153W 735 nt9.45□□□□□ -0.9
DDC1Q08949 FUB1YCR076C 753 nt9.44□□□□□ -0.9
DDC1Q08949 YER188WYER188W 720 nt9.44□□□□□ -0.9
DDC1Q08949 tS(GCU)LtS(GCU)L 80 nt9.44□□□□□ -0.9
DDC1Q08949 NAR1YNL240C 1476 nt9.44□□□□□ -0.9
DDC1Q08949 FLR1YBR008C 1647 nt9.42□□□□□ -0.9
DDC1Q08949 DLD2YDL178W 1593 nt9.41□□□□□ -0.9
DDC1Q08949 SNZ1YMR096W 894 nt9.4□□□□□ -0.9
DDC1Q08949 RAS2YNL098C 969 nt9.4□□□□□ -0.9
DDC1Q08949 TPS1YBR126C 1488 nt9.4□□□□□ -0.91
DDC1Q08949 OYE2YHR179W 1203 nt9.39□□□□□ -0.91
DDC1Q08949 PGC1YPL206C 966 nt9.39□□□□□ -0.91
DDC1Q08949 THI72YOR192C 1800 nt9.39□□□□□ -0.91
DDC1Q08949 RDN25-1RDN25-1 3396 nt9.39□□□□□ -0.91
DDC1Q08949 RDN25-2RDN25-2 3396 nt9.39□□□□□ -0.91
DDC1Q08949 EAF3YPR023C 1206 nt9.38□□□□□ -0.91
DDC1Q08949 RSC8YFR037C 1674 nt9.38□□□□□ -0.91
DDC1Q08949 YPS3YLR121C 1527 nt9.37□□□□□ -0.91
DDC1Q08949 FMS1YMR020W 1527 nt9.37□□□□□ -0.91
DDC1Q08949 YPR126CYPR126C 309 nt9.36□□□□□ -0.91
DDC1Q08949 PAU5YFL020C 369 nt9.35□□□□□ -0.91
DDC1Q08949 TAF13YML098W 504 nt9.34□□□□□ -0.91
DDC1Q08949 YBR232CYBR232C 360 nt9.34□□□□□ -0.91
DDC1Q08949 DAK2YFL053W 1776 nt9.33□□□□□ -0.92
DDC1Q08949 HEM13YDR044W 987 nt9.32□□□□□ -0.92
DDC1Q08949 STP3YLR375W 1032 nt9.32□□□□□ -0.92
DDC1Q08949 SPP2YOR148C 558 nt9.32□□□□□ -0.92
DDC1Q08949 OSH7YHR001W 1314 nt9.31□□□□□ -0.92
DDC1Q08949 ACH1YBL015W 1581 nt9.3□□□□□ -0.92
DDC1Q08949 CWC15YDR163W 528 nt9.3□□□□□ -0.92
DDC1Q08949 SEN2YLR105C 1134 nt9.3□□□□□ -0.92
DDC1Q08949 MHF1YOL086W-A 273 nt9.3□□□□□ -0.92
DDC1Q08949 YAT1YAR035W 2064 nt9.3□□□□□ -0.92
DDC1Q08949 TMA23YMR269W 636 nt9.29□□□□□ -0.92
DDC1Q08949 YMR262WYMR262W 942 nt9.28□□□□□ -0.92
DDC1Q08949 CTI6YPL181W 1521 nt9.27□□□□□ -0.93
DDC1Q08949 SOL2YCR073W-A 948 nt9.27□□□□□ -0.93
DDC1Q08949 DDI1YER143W 1287 nt9.26□□□□□ -0.93
DDC1Q08949 POT1YIL160C 1254 nt9.25□□□□□ -0.93
DDC1Q08949 NAP1YKR048C 1254 nt9.25□□□□□ -0.93
DDC1Q08949 IML3YBR107C 738 nt9.24□□□□□ -0.93
DDC1Q08949 TAT2YOL020W 1779 nt9.24□□□□□ -0.93
DDC1Q08949 IMO32YGR031W 1029 nt9.23□□□□□ -0.93
DDC1Q08949 GID7YCL039W 2238 nt9.23□□□□□ -0.93
DDC1Q08949 GSF2YML048W 1212 nt9.22□□□□□ -0.93
DDC1Q08949 YNL024CYNL024C 741 nt9.22□□□□□ -0.93
DDC1Q08949 PUP1YOR157C 786 nt9.22□□□□□ -0.93
DDC1Q08949 INA1YLR413W 2028 nt9.21□□□□□ -0.93
DDC1Q08949 LSM5YER146W 282 nt9.21□□□□□ -0.94
DDC1Q08949 YDR455CYDR455C 309 nt9.2□□□□□ -0.94
DDC1Q08949 RPC82YPR190C 1965 nt9.2□□□□□ -0.94
DDC1Q08949 FRE6YLL051C 2139 nt9.2□□□□□ -0.94
DDC1Q08949 VPS62YGR141W 1404 nt9.2□□□□□ -0.94
DDC1Q08949 TUB4YLR212C 1422 nt9.2□□□□□ -0.94
DDC1Q08949 YJL064WYJL064W 396 nt9.19□□□□□ -0.94
DDC1Q08949 MET2YNL277W 1461 nt9.19□□□□□ -0.94
DDC1Q08949 APS2YJR058C 444 nt9.18□□□□□ -0.94
DDC1Q08949 PAR32YDL173W 888 nt9.17□□□□□ -0.94
DDC1Q08949 NIF3YGL221C 867 nt9.17□□□□□ -0.94
DDC1Q08949 RRT8YOL048C 1029 nt9.17□□□□□ -0.94
DDC1Q08949 YIL100C-AYIL100C-A 339 nt9.16□□□□□ -0.94
DDC1Q08949 PAU19YMR325W 375 nt9.16□□□□□ -0.94
DDC1Q08949 YDL086WYDL086W 822 nt9.15□□□□□ -0.94
DDC1Q08949 YFR036W-AYFR036W-A 651 nt9.15□□□□□ -0.94
DDC1Q08949 ASP3-1YLR155C 1089 nt9.15□□□□□ -0.94
DDC1Q08949 ASP3-2YLR157C 1089 nt9.15□□□□□ -0.94
DDC1Q08949 ASP3-3YLR158C 1089 nt9.15□□□□□ -0.94
DDC1Q08949 ASP3-4YLR160C 1089 nt9.15□□□□□ -0.94
DDC1Q08949 HEL2YDR266C 1920 nt9.14□□□□□ -0.95
DDC1Q08949 SPS100YHR139C 981 nt9.14□□□□□ -0.95
DDC1Q08949 ERG13YML126C 1476 nt9.13□□□□□ -0.95
DDC1Q08949 HSL7YBR133C 2484 nt9.11□□□□□ -0.95
DDC1Q08949 ILV3YJR016C 1758 nt9.1□□□□□ -0.95
DDC1Q08949 ADE8YDR408C 645 nt9.1□□□□□ -0.95
DDC1Q08949 YOR325WYOR325W 474 nt9.1□□□□□ -0.95
DDC1Q08949 CCT2YIL142W 1584 nt9.09□□□□□ -0.95
DDC1Q08949 OPI10YOL032W 741 nt9.08□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 60 ms