Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 SED1YDR077W 1017 nt16.78■□□□□ 0.28
TY1B-DR4Q07793 LSB5YCL034W 1065 nt16.74■□□□□ 0.27
TY1B-DR4Q07793 GSF2YML048W 1212 nt16.73■□□□□ 0.27
TY1B-DR4Q07793 SAM50YNL026W 1455 nt16.7■□□□□ 0.26
TY1B-DR4Q07793 YPL251WYPL251W 303 nt16.7■□□□□ 0.26
TY1B-DR4Q07793 CSM1YCR086W 573 nt16.67■□□□□ 0.26
TY1B-DR4Q07793 ACO2YJL200C 2370 nt16.66■□□□□ 0.26
TY1B-DR4Q07793 YCR025CYCR025C 411 nt16.63■□□□□ 0.25
TY1B-DR4Q07793 SAM3YPL274W 1764 nt16.61■□□□□ 0.25
TY1B-DR4Q07793 MHF1YOL086W-A 273 nt16.6■□□□□ 0.25
TY1B-DR4Q07793 POT1YIL160C 1254 nt16.59■□□□□ 0.25
TY1B-DR4Q07793 NUC1YJL208C 990 nt16.59■□□□□ 0.25
TY1B-DR4Q07793 PRM5YIL117C 957 nt16.56■□□□□ 0.24
TY1B-DR4Q07793 YPR126CYPR126C 309 nt16.56■□□□□ 0.24
TY1B-DR4Q07793 CDD1YLR245C 429 nt16.54■□□□□ 0.24
TY1B-DR4Q07793 CTI6YPL181W 1521 nt16.53■□□□□ 0.24
TY1B-DR4Q07793 LYS20YDL182W 1287 nt16.52■□□□□ 0.24
TY1B-DR4Q07793 YMR103CYMR103C 363 nt16.52■□□□□ 0.24
TY1B-DR4Q07793 LIP1YMR298W 453 nt16.51■□□□□ 0.23
TY1B-DR4Q07793 RIB7YBR153W 735 nt16.49■□□□□ 0.23
TY1B-DR4Q07793 SSN3YPL042C 1668 nt16.47■□□□□ 0.23
TY1B-DR4Q07793 BNI5YNL166C 1347 nt16.47■□□□□ 0.23
TY1B-DR4Q07793 IRC24YIR036C 792 nt16.46■□□□□ 0.23
TY1B-DR4Q07793 IGD1YFR017C 588 nt16.44■□□□□ 0.22
TY1B-DR4Q07793 NIF3YGL221C 867 nt16.44■□□□□ 0.22
TY1B-DR4Q07793 RPT5YOR117W 1305 nt16.43■□□□□ 0.22
TY1B-DR4Q07793 YBL086CYBL086C 1401 nt16.42■□□□□ 0.22
TY1B-DR4Q07793 FUR4YBR021W 1902 nt16.39■□□□□ 0.21
TY1B-DR4Q07793 TOA2YKL058W 369 nt16.38■□□□□ 0.21
TY1B-DR4Q07793 NAS2YIL007C 663 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)DtA(AGC)D 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)FtA(AGC)F 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)GtA(AGC)G 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)HtA(AGC)H 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)JtA(AGC)J 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)K1tA(AGC)K1 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)K2tA(AGC)K2 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)LtA(AGC)L 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)M1tA(AGC)M1 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)M2tA(AGC)M2 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 tA(AGC)PtA(AGC)P 73 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 SWM1YDR260C 513 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 SAM35YHR083W 990 nt16.37■□□□□ 0.21
TY1B-DR4Q07793 TPS1YBR126C 1488 nt16.36■□□□□ 0.21
TY1B-DR4Q07793 HIF1YLL022C 1158 nt16.35■□□□□ 0.21
TY1B-DR4Q07793 YGR259CYGR259C 441 nt16.34■□□□□ 0.21
TY1B-DR4Q07793 MFG1YDL233W 1377 nt16.33■□□□□ 0.21
TY1B-DR4Q07793 GND2YGR256W 1479 nt16.33■□□□□ 0.2
TY1B-DR4Q07793 IPL1YPL209C 1104 nt16.3■□□□□ 0.2
TY1B-DR4Q07793 BRR1YPR057W 1026 nt16.3■□□□□ 0.2
TY1B-DR4Q07793 HOG1YLR113W 1308 nt16.29■□□□□ 0.2
TY1B-DR4Q07793 PHO23YNL097C 993 nt16.27■□□□□ 0.2
TY1B-DR4Q07793 DAK2YFL053W 1776 nt16.27■□□□□ 0.2
TY1B-DR4Q07793 YOR343CYOR343C 327 nt16.27■□□□□ 0.19
TY1B-DR4Q07793 RPL12BYDR418W 498 nt16.26■□□□□ 0.19
TY1B-DR4Q07793 KAE1YKR038C 1161 nt16.26■□□□□ 0.19
TY1B-DR4Q07793 PAU21YOR394W 495 nt16.26■□□□□ 0.19
TY1B-DR4Q07793 PAU22YPL282C 495 nt16.26■□□□□ 0.19
TY1B-DR4Q07793 OYE2YHR179W 1203 nt16.25■□□□□ 0.19
TY1B-DR4Q07793 FLX1YIL134W 936 nt16.25■□□□□ 0.19
TY1B-DR4Q07793 DDI1YER143W 1287 nt16.24■□□□□ 0.19
TY1B-DR4Q07793 OYE3YPL171C 1203 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 TGA1tA(UGC)A 73 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 tA(UGC)EtA(UGC)E 73 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 tA(UGC)GtA(UGC)G 73 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 tA(UGC)LtA(UGC)L 73 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 tA(UGC)OtA(UGC)O 73 nt16.23■□□□□ 0.19
TY1B-DR4Q07793 GRH1YDR517W 1119 nt16.2■□□□□ 0.18
TY1B-DR4Q07793 TRT2tT(CGU)K 72 nt16.19■□□□□ 0.18
TY1B-DR4Q07793 YKR005CYKR005C 1578 nt16.19■□□□□ 0.18
TY1B-DR4Q07793 YMR007WYMR007W 381 nt16.19■□□□□ 0.18
TY1B-DR4Q07793 HXT1YHR094C 1713 nt16.19■□□□□ 0.18
TY1B-DR4Q07793 FCY1YPR062W 477 nt16.18■□□□□ 0.18
TY1B-DR4Q07793 SPE2YOL052C 1191 nt16.17■□□□□ 0.18
TY1B-DR4Q07793 PCP1YGR101W 1041 nt16.16■□□□□ 0.18
TY1B-DR4Q07793 SAM2YDR502C 1155 nt16.16■□□□□ 0.18
TY1B-DR4Q07793 YAL016C-AYAL016C-A 315 nt16.15■□□□□ 0.18
TY1B-DR4Q07793 YMR206WYMR206W 942 nt16.15■□□□□ 0.18
TY1B-DR4Q07793 IML3YBR107C 738 nt16.14■□□□□ 0.17
TY1B-DR4Q07793 YOR268CYOR268C 399 nt16.13■□□□□ 0.17
TY1B-DR4Q07793 DBP1YPL119C 1854 nt16.12■□□□□ 0.17
TY1B-DR4Q07793 YNL024CYNL024C 741 nt16.12■□□□□ 0.17
TY1B-DR4Q07793 MSC1YML128C 1542 nt16.1■□□□□ 0.17
TY1B-DR4Q07793 LEU9YOR108W 1815 nt16.09■□□□□ 0.17
TY1B-DR4Q07793 RAS2YNL098C 969 nt16.08■□□□□ 0.17
TY1B-DR4Q07793 ADH3YMR083W 1128 nt16.05■□□□□ 0.16
TY1B-DR4Q07793 TOS1YBR162C 1368 nt16.05■□□□□ 0.16
TY1B-DR4Q07793 EAF3YPR023C 1206 nt16.05■□□□□ 0.16
TY1B-DR4Q07793 PHB2YGR231C 933 nt16.03■□□□□ 0.16
TY1B-DR4Q07793 TMA23YMR269W 636 nt16.01■□□□□ 0.15
TY1B-DR4Q07793 RCR1YBR005W 642 nt16.01■□□□□ 0.15
TY1B-DR4Q07793 SPS100YHR139C 981 nt16■□□□□ 0.15
TY1B-DR4Q07793 FUB1YCR076C 753 nt15.98■□□□□ 0.15
TY1B-DR4Q07793 SER2YGR208W 930 nt15.98■□□□□ 0.15
TY1B-DR4Q07793 LSM5YER146W 282 nt15.97■□□□□ 0.15
TY1B-DR4Q07793 YER188WYER188W 720 nt15.97■□□□□ 0.15
TY1B-DR4Q07793 UFO1YML088W 2007 nt15.96■□□□□ 0.15
TY1B-DR4Q07793 YFR036W-AYFR036W-A 651 nt15.96■□□□□ 0.15
TY1B-DR4Q07793 MOB1YIL106W 945 nt15.96■□□□□ 0.15
TY1B-DR4Q07793 ADE8YDR408C 645 nt15.93■□□□□ 0.14
Retrieved 100 of 7,029 protein–RNA pairs in 108.3 ms