Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YBL086CYBL086C 1401 nt14.69□□□□□ -0.06
RKR1Q04781 CSM1YCR086W 573 nt14.68□□□□□ -0.06
RKR1Q04781 YER152W-AYER152W-A 567 nt14.68□□□□□ -0.06
RKR1Q04781 YMR103CYMR103C 363 nt14.64□□□□□ -0.07
RKR1Q04781 TAF13YML098W 504 nt14.64□□□□□ -0.07
RKR1Q04781 YMR262WYMR262W 942 nt14.64□□□□□ -0.07
RKR1Q04781 SAM3YPL274W 1764 nt14.62□□□□□ -0.07
RKR1Q04781 NUC1YJL208C 990 nt14.6□□□□□ -0.07
RKR1Q04781 SSN3YPL042C 1668 nt14.59□□□□□ -0.07
RKR1Q04781 IRC24YIR036C 792 nt14.57□□□□□ -0.08
RKR1Q04781 TOA2YKL058W 369 nt14.57□□□□□ -0.08
RKR1Q04781 APS2YJR058C 444 nt14.56□□□□□ -0.08
RKR1Q04781 BNI5YNL166C 1347 nt14.56□□□□□ -0.08
RKR1Q04781 PAR32YDL173W 888 nt14.55□□□□□ -0.08
RKR1Q04781 HXT1YHR094C 1713 nt14.54□□□□□ -0.08
RKR1Q04781 BRR1YPR057W 1026 nt14.53□□□□□ -0.08
RKR1Q04781 GND2YGR256W 1479 nt14.53□□□□□ -0.08
RKR1Q04781 DBP1YPL119C 1854 nt14.52□□□□□ -0.08
RKR1Q04781 TUB4YLR212C 1422 nt14.48□□□□□ -0.09
RKR1Q04781 YPR126CYPR126C 309 nt14.47□□□□□ -0.09
RKR1Q04781 RIB7YBR153W 735 nt14.47□□□□□ -0.09
RKR1Q04781 RPT5YOR117W 1305 nt14.47□□□□□ -0.09
RKR1Q04781 TRT2tT(CGU)K 72 nt14.45□□□□□ -0.1
RKR1Q04781 GSF2YML048W 1212 nt14.45□□□□□ -0.1
RKR1Q04781 PHO23YNL097C 993 nt14.45□□□□□ -0.1
RKR1Q04781 BUD20YLR074C 501 nt14.44□□□□□ -0.1
RKR1Q04781 PRP4YPR178W 1398 nt14.44□□□□□ -0.1
RKR1Q04781 YCP4YCR004C 744 nt14.43□□□□□ -0.1
RKR1Q04781 MHF1YOL086W-A 273 nt14.43□□□□□ -0.1
RKR1Q04781 LEU9YOR108W 1815 nt14.42□□□□□ -0.1
RKR1Q04781 DPS1YLL018C 1674 nt14.41□□□□□ -0.1
RKR1Q04781 KRE1YNL322C 942 nt14.4□□□□□ -0.1
RKR1Q04781 CTI6YPL181W 1521 nt14.38□□□□□ -0.11
RKR1Q04781 TPS1YBR126C 1488 nt14.38□□□□□ -0.11
RKR1Q04781 SAM2YDR502C 1155 nt14.37□□□□□ -0.11
RKR1Q04781 POT1YIL160C 1254 nt14.37□□□□□ -0.11
RKR1Q04781 UFO1YML088W 2007 nt14.35□□□□□ -0.11
RKR1Q04781 OYE2YHR179W 1203 nt14.34□□□□□ -0.11
RKR1Q04781 MSC1YML128C 1542 nt14.32□□□□□ -0.12
RKR1Q04781 HIF1YLL022C 1158 nt14.32□□□□□ -0.12
RKR1Q04781 CDD1YLR245C 429 nt14.32□□□□□ -0.12
RKR1Q04781 SNF1YDR477W 1902 nt14.31□□□□□ -0.12
RKR1Q04781 SAM50YNL026W 1455 nt14.3□□□□□ -0.12
RKR1Q04781 DDI1YER143W 1287 nt14.3□□□□□ -0.12
RKR1Q04781 DAK2YFL053W 1776 nt14.29□□□□□ -0.12
RKR1Q04781 SHY1YGR112W 1170 nt14.28□□□□□ -0.12
RKR1Q04781 NIF3YGL221C 867 nt14.26□□□□□ -0.13
RKR1Q04781 OYE3YPL171C 1203 nt14.25□□□□□ -0.13
RKR1Q04781 ACO2YJL200C 2370 nt14.24□□□□□ -0.13
RKR1Q04781 SEC61YLR378C 1443 nt14.22□□□□□ -0.13
RKR1Q04781 YCR025CYCR025C 411 nt14.22□□□□□ -0.13
RKR1Q04781 YER188WYER188W 720 nt14.22□□□□□ -0.13
RKR1Q04781 RAS2YNL098C 969 nt14.22□□□□□ -0.13
RKR1Q04781 FUB1YCR076C 753 nt14.21□□□□□ -0.14
RKR1Q04781 EAF3YPR023C 1206 nt14.19□□□□□ -0.14
RKR1Q04781 NAS2YIL007C 663 nt14.18□□□□□ -0.14
RKR1Q04781 FLR1YBR008C 1647 nt14.16□□□□□ -0.14
RKR1Q04781 IGD1YFR017C 588 nt14.16□□□□□ -0.14
RKR1Q04781 TMA23YMR269W 636 nt14.14□□□□□ -0.15
RKR1Q04781 YNL024CYNL024C 741 nt14.12□□□□□ -0.15
RKR1Q04781 IML3YBR107C 738 nt14.12□□□□□ -0.15
RKR1Q04781 LYS20YDL182W 1287 nt14.1□□□□□ -0.15
RKR1Q04781 MFG1YDL233W 1377 nt14.1□□□□□ -0.15
RKR1Q04781 tA(AGC)DtA(AGC)D 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)FtA(AGC)F 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)GtA(AGC)G 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)HtA(AGC)H 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)JtA(AGC)J 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)K1tA(AGC)K1 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)K2tA(AGC)K2 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)LtA(AGC)L 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)M1tA(AGC)M1 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)M2tA(AGC)M2 73 nt14.08□□□□□ -0.16
RKR1Q04781 tA(AGC)PtA(AGC)P 73 nt14.08□□□□□ -0.16
RKR1Q04781 LSM5YER146W 282 nt14.08□□□□□ -0.16
RKR1Q04781 URA6YKL024C 615 nt14.08□□□□□ -0.16
RKR1Q04781 RSC8YFR037C 1674 nt14.07□□□□□ -0.16
RKR1Q04781 RPL12BYDR418W 498 nt14.05□□□□□ -0.16
RKR1Q04781 SWM1YDR260C 513 nt14.05□□□□□ -0.16
RKR1Q04781 ADE8YDR408C 645 nt14.04□□□□□ -0.16
RKR1Q04781 YFR036W-AYFR036W-A 651 nt14.03□□□□□ -0.16
RKR1Q04781 SPS100YHR139C 981 nt14.03□□□□□ -0.16
RKR1Q04781 FLX1YIL134W 936 nt14.03□□□□□ -0.16
RKR1Q04781 DLD2YDL178W 1593 nt14.02□□□□□ -0.16
RKR1Q04781 HOG1YLR113W 1308 nt14.02□□□□□ -0.16
RKR1Q04781 SPE2YOL052C 1191 nt14.02□□□□□ -0.16
RKR1Q04781 OSH7YHR001W 1314 nt14.01□□□□□ -0.17
RKR1Q04781 OXA1YER154W 1209 nt14.01□□□□□ -0.17
RKR1Q04781 YOR343CYOR343C 327 nt14.01□□□□□ -0.17
RKR1Q04781 IPL1YPL209C 1104 nt14.01□□□□□ -0.17
RKR1Q04781 PET8YNL003C 855 nt14□□□□□ -0.17
RKR1Q04781 YPS3YLR121C 1527 nt13.99□□□□□ -0.17
RKR1Q04781 PAU21YOR394W 495 nt13.97□□□□□ -0.17
RKR1Q04781 PAU22YPL282C 495 nt13.97□□□□□ -0.17
RKR1Q04781 BIO5YNR056C 1686 nt13.97□□□□□ -0.17
RKR1Q04781 ABZ2YMR289W 1125 nt13.96□□□□□ -0.17
RKR1Q04781 SOL2YCR073W-A 948 nt13.96□□□□□ -0.18
RKR1Q04781 TOS1YBR162C 1368 nt13.94□□□□□ -0.18
RKR1Q04781 IMO32YGR031W 1029 nt13.93□□□□□ -0.18
RKR1Q04781 HEM13YDR044W 987 nt13.92□□□□□ -0.18
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms