Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 SPT20YOL148C 1815 nt9.09□□□□□ -0.95
LSM5P40089 ZRT3YKL175W 1512 nt9.08□□□□□ -0.96
LSM5P40089 TOA2YKL058W 369 nt9.07□□□□□ -0.96
LSM5P40089 YMR103CYMR103C 363 nt9.07□□□□□ -0.96
LSM5P40089 MAS1YLR163C 1389 nt9.07□□□□□ -0.96
LSM5P40089 HSL7YBR133C 2484 nt9.07□□□□□ -0.96
LSM5P40089 INA1YLR413W 2028 nt9.06□□□□□ -0.96
LSM5P40089 TRT2tT(CGU)K 72 nt9.06□□□□□ -0.96
LSM5P40089 URA6YKL024C 615 nt9.06□□□□□ -0.96
LSM5P40089 RIB2YOL066C 1776 nt9.06□□□□□ -0.96
LSM5P40089 CSM1YCR086W 573 nt9.05□□□□□ -0.96
LSM5P40089 YEL008WYEL008W 381 nt9.05□□□□□ -0.96
LSM5P40089 PHO23YNL097C 993 nt9.03□□□□□ -0.96
LSM5P40089 VRG4YGL225W 1014 nt9.02□□□□□ -0.97
LSM5P40089 GND2YGR256W 1479 nt9.02□□□□□ -0.97
LSM5P40089 OXA1YER154W 1209 nt9.01□□□□□ -0.97
LSM5P40089 RFC1YOR217W 2586 nt9□□□□□ -0.97
LSM5P40089 OYE3YPL171C 1203 nt8.99□□□□□ -0.97
LSM5P40089 MSC1YML128C 1542 nt8.99□□□□□ -0.97
LSM5P40089 SEC61YLR378C 1443 nt8.98□□□□□ -0.97
LSM5P40089 YJL055WYJL055W 738 nt8.98□□□□□ -0.97
LSM5P40089 LSB5YCL034W 1065 nt8.98□□□□□ -0.97
LSM5P40089 YJL118WYJL118W 660 nt8.97□□□□□ -0.97
LSM5P40089 BNI5YNL166C 1347 nt8.97□□□□□ -0.97
LSM5P40089 RPC82YPR190C 1965 nt8.97□□□□□ -0.97
LSM5P40089 SAM3YPL274W 1764 nt8.96□□□□□ -0.98
LSM5P40089 HEM14YER014W 1620 nt8.95□□□□□ -0.98
LSM5P40089 ADH7YCR105W 1086 nt8.95□□□□□ -0.98
LSM5P40089 YJL067WYJL067W 351 nt8.95□□□□□ -0.98
LSM5P40089 PET8YNL003C 855 nt8.95□□□□□ -0.98
LSM5P40089 RDN25-1RDN25-1 3396 nt8.94□□□□□ -0.98
LSM5P40089 RDN25-2RDN25-2 3396 nt8.94□□□□□ -0.98
LSM5P40089 NUC1YJL208C 990 nt8.94□□□□□ -0.98
LSM5P40089 RPT5YOR117W 1305 nt8.93□□□□□ -0.98
LSM5P40089 GAL3YDR009W 1563 nt8.93□□□□□ -0.98
LSM5P40089 CCT5YJR064W 1689 nt8.92□□□□□ -0.98
LSM5P40089 SAM2YDR502C 1155 nt8.92□□□□□ -0.98
LSM5P40089 CPD1YGR247W 720 nt8.92□□□□□ -0.98
LSM5P40089 Q0010Q0010 387 nt8.9□□□□□ -0.98
LSM5P40089 YER188WYER188W 720 nt8.89□□□□□ -0.99
LSM5P40089 PAU15YIR041W 375 nt8.89□□□□□ -0.99
LSM5P40089 RIB7YBR153W 735 nt8.89□□□□□ -0.99
LSM5P40089 FUB1YCR076C 753 nt8.88□□□□□ -0.99
LSM5P40089 GPN2YOR262W 1044 nt8.88□□□□□ -0.99
LSM5P40089 DTR1YBR180W 1719 nt8.87□□□□□ -0.99
LSM5P40089 FLR1YBR008C 1647 nt8.87□□□□□ -0.99
LSM5P40089 DLD2YDL178W 1593 nt8.86□□□□□ -0.99
LSM5P40089 YPS3YLR121C 1527 nt8.85□□□□□ -0.99
LSM5P40089 FMS1YMR020W 1527 nt8.84□□□□□ -0.99
LSM5P40089 OYE2YHR179W 1203 nt8.83□□□□□ -1
LSM5P40089 RSC8YFR037C 1674 nt8.83□□□□□ -1
LSM5P40089 HEL2YDR266C 1920 nt8.83□□□□□ -1
LSM5P40089 ESS1YJR017C 513 nt8.82□□□□□ -1
LSM5P40089 ILV2YMR108W 2064 nt8.82□□□□□ -1
LSM5P40089 RIM8YGL045W 1629 nt8.81□□□□□ -1
LSM5P40089 RAS2YNL098C 969 nt8.81□□□□□ -1
LSM5P40089 EAF3YPR023C 1206 nt8.81□□□□□ -1
LSM5P40089 TPS1YBR126C 1488 nt8.8□□□□□ -1
LSM5P40089 YDR306CYDR306C 1437 nt8.8□□□□□ -1
LSM5P40089 RSC4YKR008W 1878 nt8.79□□□□□ -1
LSM5P40089 ACH1YBL015W 1581 nt8.79□□□□□ -1
LSM5P40089 SNZ1YMR096W 894 nt8.79□□□□□ -1
LSM5P40089 YPR126CYPR126C 309 nt8.79□□□□□ -1
LSM5P40089 YGL114WYGL114W 2178 nt8.78□□□□□ -1
LSM5P40089 SPP2YOR148C 558 nt8.78□□□□□ -1
LSM5P40089 THI72YOR192C 1800 nt8.77□□□□□ -1
LSM5P40089 HEM13YDR044W 987 nt8.77□□□□□ -1.01
LSM5P40089 CWC15YDR163W 528 nt8.77□□□□□ -1.01
LSM5P40089 OSH7YHR001W 1314 nt8.77□□□□□ -1.01
LSM5P40089 PUS7YOR243C 2031 nt8.76□□□□□ -1.01
LSM5P40089 DAK2YFL053W 1776 nt8.76□□□□□ -1.01
LSM5P40089 MUP1YGR055W 1725 nt8.75□□□□□ -1.01
LSM5P40089 tS(GCU)LtS(GCU)L 80 nt8.75□□□□□ -1.01
LSM5P40089 TAF13YML098W 504 nt8.74□□□□□ -1.01
LSM5P40089 TMA23YMR269W 636 nt8.73□□□□□ -1.01
LSM5P40089 MHF1YOL086W-A 273 nt8.73□□□□□ -1.01
LSM5P40089 PGC1YPL206C 966 nt8.73□□□□□ -1.01
LSM5P40089 YBR232CYBR232C 360 nt8.71□□□□□ -1.02
LSM5P40089 SOL2YCR073W-A 948 nt8.7□□□□□ -1.02
LSM5P40089 HOL1YNR055C 1761 nt8.7□□□□□ -1.02
LSM5P40089 STP3YLR375W 1032 nt8.69□□□□□ -1.02
LSM5P40089 VPS62YGR141W 1404 nt8.69□□□□□ -1.02
LSM5P40089 TAT2YOL020W 1779 nt8.68□□□□□ -1.02
LSM5P40089 PAU5YFL020C 369 nt8.68□□□□□ -1.02
LSM5P40089 IMO32YGR031W 1029 nt8.68□□□□□ -1.02
LSM5P40089 YIL100C-AYIL100C-A 339 nt8.68□□□□□ -1.02
LSM5P40089 IML3YBR107C 738 nt8.68□□□□□ -1.02
LSM5P40089 CTI6YPL181W 1521 nt8.68□□□□□ -1.02
LSM5P40089 DDI1YER143W 1287 nt8.67□□□□□ -1.02
LSM5P40089 NPP1YCR026C 2229 nt8.66□□□□□ -1.02
LSM5P40089 ILV3YJR016C 1758 nt8.66□□□□□ -1.02
LSM5P40089 YDL086WYDL086W 822 nt8.66□□□□□ -1.02
LSM5P40089 POT1YIL160C 1254 nt8.66□□□□□ -1.02
LSM5P40089 GSF2YML048W 1212 nt8.65□□□□□ -1.02
LSM5P40089 YMR262WYMR262W 942 nt8.65□□□□□ -1.02
LSM5P40089 YNL024CYNL024C 741 nt8.65□□□□□ -1.02
LSM5P40089 RRT8YOL048C 1029 nt8.65□□□□□ -1.02
LSM5P40089 YDR455CYDR455C 309 nt8.64□□□□□ -1.03
LSM5P40089 YJR154WYJR154W 1041 nt8.64□□□□□ -1.03
LSM5P40089 OPI10YOL032W 741 nt8.64□□□□□ -1.03
Retrieved 100 of 7,029 protein–RNA pairs in 65.7 ms