Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 CSM1YCR086W 573 nt7.45□□□□□ -1.22
RPB9P27999 YPL251WYPL251W 303 nt7.45□□□□□ -1.22
RPB9P27999 DBP1YPL119C 1854 nt7.45□□□□□ -1.22
RPB9P27999 LEU9YOR108W 1815 nt7.44□□□□□ -1.22
RPB9P27999 PAR32YDL173W 888 nt7.44□□□□□ -1.22
RPB9P27999 NUC1YJL208C 990 nt7.44□□□□□ -1.22
RPB9P27999 BRR1YPR057W 1026 nt7.44□□□□□ -1.22
RPB9P27999 HXT1YHR094C 1713 nt7.44□□□□□ -1.22
RPB9P27999 IRC24YIR036C 792 nt7.43□□□□□ -1.22
RPB9P27999 YJL118WYJL118W 660 nt7.43□□□□□ -1.22
RPB9P27999 RPT5YOR117W 1305 nt7.43□□□□□ -1.22
RPB9P27999 GAL3YDR009W 1563 nt7.42□□□□□ -1.22
RPB9P27999 TOA2YKL058W 369 nt7.41□□□□□ -1.22
RPB9P27999 YMR103CYMR103C 363 nt7.41□□□□□ -1.22
RPB9P27999 YBL086CYBL086C 1401 nt7.41□□□□□ -1.22
RPB9P27999 DPS1YLL018C 1674 nt7.41□□□□□ -1.22
RPB9P27999 GSF2YML048W 1212 nt7.4□□□□□ -1.22
RPB9P27999 SLG1YOR008C 1137 nt7.4□□□□□ -1.22
RPB9P27999 SSN3YPL042C 1668 nt7.39□□□□□ -1.23
RPB9P27999 YJR114WYJR114W 393 nt7.39□□□□□ -1.23
RPB9P27999 HIF1YLL022C 1158 nt7.39□□□□□ -1.23
RPB9P27999 RIB1YBL033C 1038 nt7.39□□□□□ -1.23
RPB9P27999 PHO23YNL097C 993 nt7.39□□□□□ -1.23
RPB9P27999 YMR262WYMR262W 942 nt7.38□□□□□ -1.23
RPB9P27999 MHF1YOL086W-A 273 nt7.38□□□□□ -1.23
RPB9P27999 POT1YIL160C 1254 nt7.37□□□□□ -1.23
RPB9P27999 TRT2tT(CGU)K 72 nt7.36□□□□□ -1.23
RPB9P27999 TIP1YBR067C 633 nt7.35□□□□□ -1.23
RPB9P27999 BNI5YNL166C 1347 nt7.34□□□□□ -1.23
RPB9P27999 MSC1YML128C 1542 nt7.34□□□□□ -1.23
RPB9P27999 YIA6YIL006W 1122 nt7.34□□□□□ -1.23
RPB9P27999 SEC61YLR378C 1443 nt7.34□□□□□ -1.23
RPB9P27999 SAM2YDR502C 1155 nt7.33□□□□□ -1.24
RPB9P27999 OXA1YER154W 1209 nt7.33□□□□□ -1.24
RPB9P27999 TUB4YLR212C 1422 nt7.33□□□□□ -1.24
RPB9P27999 GND2YGR256W 1479 nt7.32□□□□□ -1.24
RPB9P27999 YPR126CYPR126C 309 nt7.32□□□□□ -1.24
RPB9P27999 IML3YBR107C 738 nt7.32□□□□□ -1.24
RPB9P27999 SAM3YPL274W 1764 nt7.32□□□□□ -1.24
RPB9P27999 SNZ1YMR096W 894 nt7.31□□□□□ -1.24
RPB9P27999 HSL7YBR133C 2484 nt7.3□□□□□ -1.24
RPB9P27999 SOD2YHR008C 702 nt7.3□□□□□ -1.24
RPB9P27999 CTI6YPL181W 1521 nt7.29□□□□□ -1.24
RPB9P27999 OYE2YHR179W 1203 nt7.29□□□□□ -1.24
RPB9P27999 DAK2YFL053W 1776 nt7.28□□□□□ -1.24
RPB9P27999 SHY1YGR112W 1170 nt7.28□□□□□ -1.24
RPB9P27999 ERG6YML008C 1152 nt7.28□□□□□ -1.24
RPB9P27999 YNL024CYNL024C 741 nt7.28□□□□□ -1.24
RPB9P27999 RAS2YNL098C 969 nt7.28□□□□□ -1.24
RPB9P27999 UFO1YML088W 2007 nt7.27□□□□□ -1.25
RPB9P27999 YER188WYER188W 720 nt7.27□□□□□ -1.25
RPB9P27999 URA6YKL024C 615 nt7.27□□□□□ -1.25
RPB9P27999 NAR1YNL240C 1476 nt7.27□□□□□ -1.25
RPB9P27999 TPS1YBR126C 1488 nt7.27□□□□□ -1.25
RPB9P27999 HEL2YDR266C 1920 nt7.27□□□□□ -1.25
RPB9P27999 YCP4YCR004C 744 nt7.26□□□□□ -1.25
RPB9P27999 OYE3YPL171C 1203 nt7.25□□□□□ -1.25
RPB9P27999 MET2YNL277W 1461 nt7.24□□□□□ -1.25
RPB9P27999 GID7YCL039W 2238 nt7.24□□□□□ -1.25
RPB9P27999 PET8YNL003C 855 nt7.24□□□□□ -1.25
RPB9P27999 FRE6YLL051C 2139 nt7.24□□□□□ -1.25
RPB9P27999 FUB1YCR076C 753 nt7.23□□□□□ -1.25
RPB9P27999 APS2YJR058C 444 nt7.23□□□□□ -1.25
RPB9P27999 EAF3YPR023C 1206 nt7.23□□□□□ -1.25
RPB9P27999 CMP2YML057W 1815 nt7.22□□□□□ -1.25
RPB9P27999 YAT1YAR035W 2064 nt7.21□□□□□ -1.25
RPB9P27999 SNF1YDR477W 1902 nt7.21□□□□□ -1.25
RPB9P27999 NIF3YGL221C 867 nt7.21□□□□□ -1.26
RPB9P27999 IGD1YFR017C 588 nt7.2□□□□□ -1.26
RPB9P27999 ZRT3YKL175W 1512 nt7.2□□□□□ -1.26
RPB9P27999 RDN25-1RDN25-1 3396 nt7.2□□□□□ -1.26
RPB9P27999 RDN25-2RDN25-2 3396 nt7.2□□□□□ -1.26
RPB9P27999 SFP1YLR403W 2052 nt7.19□□□□□ -1.26
RPB9P27999 POP2YNR052C 1302 nt7.19□□□□□ -1.26
RPB9P27999 QDR2YIL121W 1629 nt7.19□□□□□ -1.26
RPB9P27999 TMA23YMR269W 636 nt7.18□□□□□ -1.26
RPB9P27999 SAM50YNL026W 1455 nt7.17□□□□□ -1.26
RPB9P27999 NPP1YCR026C 2229 nt7.17□□□□□ -1.26
RPB9P27999 OSH7YHR001W 1314 nt7.17□□□□□ -1.26
RPB9P27999 YCR025CYCR025C 411 nt7.16□□□□□ -1.26
RPB9P27999 DLD2YDL178W 1593 nt7.16□□□□□ -1.26
RPB9P27999 IMO32YGR031W 1029 nt7.15□□□□□ -1.26
RPB9P27999 SPS100YHR139C 981 nt7.14□□□□□ -1.27
RPB9P27999 IPL1YPL209C 1104 nt7.14□□□□□ -1.27
RPB9P27999 ACO2YJL200C 2370 nt7.13□□□□□ -1.27
RPB9P27999 YER152W-AYER152W-A 567 nt7.13□□□□□ -1.27
RPB9P27999 KRE1YNL322C 942 nt7.13□□□□□ -1.27
RPB9P27999 tA(AGC)DtA(AGC)D 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)FtA(AGC)F 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)GtA(AGC)G 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)HtA(AGC)H 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)JtA(AGC)J 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)K1tA(AGC)K1 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)K2tA(AGC)K2 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)LtA(AGC)L 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)M1tA(AGC)M1 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)M2tA(AGC)M2 73 nt7.12□□□□□ -1.27
RPB9P27999 tA(AGC)PtA(AGC)P 73 nt7.12□□□□□ -1.27
RPB9P27999 DDI1YER143W 1287 nt7.11□□□□□ -1.27
RPB9P27999 LSM5YER146W 282 nt7.11□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms