Protein–RNA interactions for Protein: P25364

HCM1, Forkhead transcription factor HCM1, yeastyeast

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCM1P25364 RDN25-1RDN25-1 3396 nt9.3□□□□□ -0.92
HCM1P25364 RDN25-2RDN25-2 3396 nt9.3□□□□□ -0.92
HCM1P25364 MTG2YHR168W 1557 nt9.27□□□□□ -0.93
HCM1P25364 RDN18-1RDN18-1 1800 nt9.26□□□□□ -0.93
HCM1P25364 RDN18-2RDN18-2 1800 nt9.26□□□□□ -0.93
HCM1P25364 THI72YOR192C 1800 nt9.26□□□□□ -0.93
HCM1P25364 YER152W-AYER152W-A 567 nt9.25□□□□□ -0.93
HCM1P25364 DIF1YLR437C 402 nt9.24□□□□□ -0.93
HCM1P25364 YJL055WYJL055W 738 nt9.23□□□□□ -0.93
HCM1P25364 YCP4YCR004C 744 nt9.21□□□□□ -0.94
HCM1P25364 CSM2YIL132C 642 nt9.2□□□□□ -0.94
HCM1P25364 YMR262WYMR262W 942 nt9.19□□□□□ -0.94
HCM1P25364 BUD20YLR074C 501 nt9.18□□□□□ -0.94
HCM1P25364 GSF2YML048W 1212 nt9.17□□□□□ -0.94
HCM1P25364 TUB4YLR212C 1422 nt9.16□□□□□ -0.94
HCM1P25364 UGA4YDL210W 1716 nt9.15□□□□□ -0.94
HCM1P25364 RTN2YDL204W 1182 nt9.15□□□□□ -0.94
HCM1P25364 PLB1YMR008C 1995 nt9.13□□□□□ -0.95
HCM1P25364 SAM50YNL026W 1455 nt9.11□□□□□ -0.95
HCM1P25364 SPT20YOL148C 1815 nt9.1□□□□□ -0.95
HCM1P25364 POT1YIL160C 1254 nt9.1□□□□□ -0.95
HCM1P25364 MHF1YOL086W-A 273 nt9.1□□□□□ -0.95
HCM1P25364 KRE1YNL322C 942 nt9.09□□□□□ -0.95
HCM1P25364 LSB5YCL034W 1065 nt9.08□□□□□ -0.96
HCM1P25364 SED1YDR077W 1017 nt9.07□□□□□ -0.96
HCM1P25364 RIB7YBR153W 735 nt9.07□□□□□ -0.96
HCM1P25364 RPC82YPR190C 1965 nt9.06□□□□□ -0.96
HCM1P25364 HEL2YDR266C 1920 nt9.06□□□□□ -0.96
HCM1P25364 GAL3YDR009W 1563 nt9.06□□□□□ -0.96
HCM1P25364 UTR1YJR049C 1593 nt9.04□□□□□ -0.96
HCM1P25364 CSM1YCR086W 573 nt9.03□□□□□ -0.96
HCM1P25364 YJL118WYJL118W 660 nt9.03□□□□□ -0.96
HCM1P25364 HIF1YLL022C 1158 nt9.03□□□□□ -0.96
HCM1P25364 YER190C-AYER190C-A 576 nt9.01□□□□□ -0.97
HCM1P25364 YGR296C-AYGR296C-A 576 nt9.01□□□□□ -0.97
HCM1P25364 SAM35YHR083W 990 nt9.01□□□□□ -0.97
HCM1P25364 YML133W-AYML133W-A 576 nt9.01□□□□□ -0.97
HCM1P25364 SNZ1YMR096W 894 nt9.01□□□□□ -0.97
HCM1P25364 YNL339W-AYNL339W-A 576 nt9.01□□□□□ -0.97
HCM1P25364 YPL283W-AYPL283W-A 576 nt9.01□□□□□ -0.97
HCM1P25364 MET2YNL277W 1461 nt9□□□□□ -0.97
HCM1P25364 RPT5YOR117W 1305 nt9□□□□□ -0.97
HCM1P25364 APS2YJR058C 444 nt8.99□□□□□ -0.97
HCM1P25364 YCR025CYCR025C 411 nt8.98□□□□□ -0.97
HCM1P25364 RPL12BYDR418W 498 nt8.98□□□□□ -0.97
HCM1P25364 NUC1YJL208C 990 nt8.98□□□□□ -0.97
HCM1P25364 IGD1YFR017C 588 nt8.97□□□□□ -0.97
HCM1P25364 LIP1YMR298W 453 nt8.97□□□□□ -0.97
HCM1P25364 INA1YLR413W 2028 nt8.97□□□□□ -0.97
HCM1P25364 YPR126CYPR126C 309 nt8.96□□□□□ -0.98
HCM1P25364 ACO2YJL200C 2370 nt8.95□□□□□ -0.98
HCM1P25364 CTI6YPL181W 1521 nt8.95□□□□□ -0.98
HCM1P25364 PAU21YOR394W 495 nt8.95□□□□□ -0.98
HCM1P25364 PAU22YPL282C 495 nt8.95□□□□□ -0.98
HCM1P25364 YOR343CYOR343C 327 nt8.94□□□□□ -0.98
HCM1P25364 IML3YBR107C 738 nt8.94□□□□□ -0.98
HCM1P25364 MEP3YPR138C 1470 nt8.94□□□□□ -0.98
HCM1P25364 NIF3YGL221C 867 nt8.93□□□□□ -0.98
HCM1P25364 TOS1YBR162C 1368 nt8.93□□□□□ -0.98
HCM1P25364 RIM8YGL045W 1629 nt8.91□□□□□ -0.98
HCM1P25364 SWM1YDR260C 513 nt8.91□□□□□ -0.98
HCM1P25364 YOR268CYOR268C 399 nt8.91□□□□□ -0.98
HCM1P25364 IPL1YPL209C 1104 nt8.91□□□□□ -0.98
HCM1P25364 YPL251WYPL251W 303 nt8.91□□□□□ -0.98
HCM1P25364 YAL016C-AYAL016C-A 315 nt8.9□□□□□ -0.98
HCM1P25364 YMR007WYMR007W 381 nt8.9□□□□□ -0.98
HCM1P25364 RCR1YBR005W 642 nt8.9□□□□□ -0.98
HCM1P25364 YGL114WYGL114W 2178 nt8.89□□□□□ -0.99
HCM1P25364 YMR103CYMR103C 363 nt8.89□□□□□ -0.99
HCM1P25364 tA(AGC)DtA(AGC)D 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)FtA(AGC)F 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)GtA(AGC)G 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)HtA(AGC)H 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)JtA(AGC)J 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)K1tA(AGC)K1 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)K2tA(AGC)K2 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)LtA(AGC)L 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)M1tA(AGC)M1 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)M2tA(AGC)M2 73 nt8.88□□□□□ -0.99
HCM1P25364 tA(AGC)PtA(AGC)P 73 nt8.88□□□□□ -0.99
HCM1P25364 ARO7YPR060C 771 nt8.88□□□□□ -0.99
HCM1P25364 SAM3YPL274W 1764 nt8.88□□□□□ -0.99
HCM1P25364 SSN3YPL042C 1668 nt8.88□□□□□ -0.99
HCM1P25364 MFG1YDL233W 1377 nt8.87□□□□□ -0.99
HCM1P25364 DAK2YFL053W 1776 nt8.87□□□□□ -0.99
HCM1P25364 YNL024CYNL024C 741 nt8.87□□□□□ -0.99
HCM1P25364 PHO23YNL097C 993 nt8.87□□□□□ -0.99
HCM1P25364 BRR1YPR057W 1026 nt8.87□□□□□ -0.99
HCM1P25364 MUP1YGR055W 1725 nt8.86□□□□□ -0.99
HCM1P25364 LYS20YDL182W 1287 nt8.84□□□□□ -0.99
HCM1P25364 PRM5YIL117C 957 nt8.84□□□□□ -0.99
HCM1P25364 LEU9YOR108W 1815 nt8.84□□□□□ -0.99
HCM1P25364 TOA2YKL058W 369 nt8.83□□□□□ -1
HCM1P25364 SFP1YLR403W 2052 nt8.83□□□□□ -1
HCM1P25364 BNI5YNL166C 1347 nt8.82□□□□□ -1
HCM1P25364 HRA1HRA1 564 nt8.82□□□□□ -1
HCM1P25364 TPS1YBR126C 1488 nt8.82□□□□□ -1
HCM1P25364 HOL1YNR055C 1761 nt8.81□□□□□ -1
HCM1P25364 MSC1YML128C 1542 nt8.8□□□□□ -1
HCM1P25364 YBL086CYBL086C 1401 nt8.8□□□□□ -1
Retrieved 100 of 7,029 protein–RNA pairs in 75 ms