Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 FHN1YGR131W 525 nt6.99□□□□□ -1.29
CDC43P18898 TIR3YIL011W 810 nt6.99□□□□□ -1.29
CDC43P18898 SEM1YDR363W-A 270 nt6.98□□□□□ -1.29
CDC43P18898 SGT2YOR007C 1041 nt6.98□□□□□ -1.29
CDC43P18898 FRA1YLL029W 2250 nt6.97□□□□□ -1.29
CDC43P18898 DBP1YPL119C 1854 nt6.96□□□□□ -1.29
CDC43P18898 TPN1YGL186C 1740 nt6.96□□□□□ -1.29
CDC43P18898 HXT10YFL011W 1641 nt6.96□□□□□ -1.3
CDC43P18898 DAK2YFL053W 1776 nt6.95□□□□□ -1.3
CDC43P18898 RTG1YOL067C 534 nt6.95□□□□□ -1.3
CDC43P18898 SFL1YOR140W 2301 nt6.95□□□□□ -1.3
CDC43P18898 SHY1YGR112W 1170 nt6.94□□□□□ -1.3
CDC43P18898 LPD1YFL018C 1500 nt6.94□□□□□ -1.3
CDC43P18898 NBA1YOL070C 1506 nt6.94□□□□□ -1.3
CDC43P18898 SWP1YMR149W 861 nt6.93□□□□□ -1.3
CDC43P18898 HUA1YGR268C 597 nt6.92□□□□□ -1.3
CDC43P18898 MDM35YKL053C-A 261 nt6.92□□□□□ -1.3
CDC43P18898 FIT1YDR534C 1587 nt6.91□□□□□ -1.3
CDC43P18898 POM34YLR018C 900 nt6.91□□□□□ -1.3
CDC43P18898 YML089CYML089C 369 nt6.91□□□□□ -1.3
CDC43P18898 YNL165WYNL165W 1221 nt6.91□□□□□ -1.3
CDC43P18898 VPS75YNL246W 795 nt6.91□□□□□ -1.3
CDC43P18898 TOM71YHR117W 1920 nt6.91□□□□□ -1.3
CDC43P18898 UFD1YGR048W 1086 nt6.9□□□□□ -1.3
CDC43P18898 PRO1YDR300C 1287 nt6.89□□□□□ -1.31
CDC43P18898 ZTA1YBR046C 1005 nt6.89□□□□□ -1.31
CDC43P18898 MAS1YLR163C 1389 nt6.89□□□□□ -1.31
CDC43P18898 RSC4YKR008W 1878 nt6.89□□□□□ -1.31
CDC43P18898 YNL115CYNL115C 1935 nt6.88□□□□□ -1.31
CDC43P18898 PET20YPL159C 762 nt6.88□□□□□ -1.31
CDC43P18898 Q0144Q0144 330 nt6.87□□□□□ -1.31
CDC43P18898 RBG1YAL036C 1110 nt6.87□□□□□ -1.31
CDC43P18898 DIF1YLR437C 402 nt6.87□□□□□ -1.31
CDC43P18898 HXT1YHR094C 1713 nt6.87□□□□□ -1.31
CDC43P18898 CWC15YDR163W 528 nt6.86□□□□□ -1.31
CDC43P18898 SHH4YLR164W 507 nt6.86□□□□□ -1.31
CDC43P18898 PEX25YPL112C 1185 nt6.86□□□□□ -1.31
CDC43P18898 AGP3YFL055W 1677 nt6.86□□□□□ -1.31
CDC43P18898 MRS6YOR370C 1812 nt6.85□□□□□ -1.31
CDC43P18898 SKG1YKR100C 1068 nt6.85□□□□□ -1.31
CDC43P18898 DUR3YHL016C 2208 nt6.85□□□□□ -1.31
CDC43P18898 QDR2YIL121W 1629 nt6.84□□□□□ -1.31
CDC43P18898 snR78snR78 87 nt6.84□□□□□ -1.31
CDC43P18898 MRP20YDR405W 792 nt6.84□□□□□ -1.31
CDC43P18898 CWP2YKL096W-A 279 nt6.84□□□□□ -1.31
CDC43P18898 GID8YMR135C 1368 nt6.83□□□□□ -1.32
CDC43P18898 ACH1YBL015W 1581 nt6.83□□□□□ -1.32
CDC43P18898 PRE6YOL038W 765 nt6.83□□□□□ -1.32
CDC43P18898 ATG15YCR068W 1563 nt6.82□□□□□ -1.32
CDC43P18898 URA6YKL024C 615 nt6.82□□□□□ -1.32
CDC43P18898 ADE5,7YGL234W 2409 nt6.82□□□□□ -1.32
CDC43P18898 HOS2YGL194C 1359 nt6.82□□□□□ -1.32
CDC43P18898 PHO23YNL097C 993 nt6.81□□□□□ -1.32
CDC43P18898 AST1YBL069W 1290 nt6.81□□□□□ -1.32
CDC43P18898 YNR068CYNR068C 819 nt6.81□□□□□ -1.32
CDC43P18898 THP3YPR045C 1413 nt6.81□□□□□ -1.32
CDC43P18898 HBS1YKR084C 1836 nt6.8□□□□□ -1.32
CDC43P18898 UFO1YML088W 2007 nt6.8□□□□□ -1.32
CDC43P18898 MIM1YOL026C 342 nt6.8□□□□□ -1.32
CDC43P18898 tD(GUC)BtD(GUC)B 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)DtD(GUC)D 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)G1tD(GUC)G1 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)G2tD(GUC)G2 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)I1tD(GUC)I1 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)I2tD(GUC)I2 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)J1tD(GUC)J1 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)J2tD(GUC)J2 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)J3tD(GUC)J3 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)J4tD(GUC)J4 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)KtD(GUC)K 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)L1tD(GUC)L1 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)L2tD(GUC)L2 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)MtD(GUC)M 72 nt6.79□□□□□ -1.32
CDC43P18898 tD(GUC)OtD(GUC)O 72 nt6.79□□□□□ -1.32
CDC43P18898 LSB5YCL034W 1065 nt6.79□□□□□ -1.32
CDC43P18898 SHB17YKR043C 816 nt6.78□□□□□ -1.32
CDC43P18898 FET5YFL041W 1869 nt6.78□□□□□ -1.32
CDC43P18898 RET2YFR051C 1641 nt6.78□□□□□ -1.32
CDC43P18898 YKL133CYKL133C 1392 nt6.78□□□□□ -1.32
CDC43P18898 YBL086CYBL086C 1401 nt6.77□□□□□ -1.33
CDC43P18898 YHR219WYHR219W 1875 nt6.77□□□□□ -1.33
CDC43P18898 SBA1YKL117W 651 nt6.77□□□□□ -1.33
CDC43P18898 URE2YNL229C 1065 nt6.77□□□□□ -1.33
CDC43P18898 EEB1YPL095C 1371 nt6.77□□□□□ -1.33
CDC43P18898 DUS3YLR401C 2007 nt6.77□□□□□ -1.33
CDC43P18898 THI6YPL214C 1623 nt6.76□□□□□ -1.33
CDC43P18898 YNL190WYNL190W 615 nt6.76□□□□□ -1.33
CDC43P18898 LAS17YOR181W 1902 nt6.76□□□□□ -1.33
CDC43P18898 DIG1YPL049C 1359 nt6.75□□□□□ -1.33
CDC43P18898 SFA1YDL168W 1161 nt6.75□□□□□ -1.33
CDC43P18898 LIP1YMR298W 453 nt6.75□□□□□ -1.33
CDC43P18898 LEU9YOR108W 1815 nt6.75□□□□□ -1.33
CDC43P18898 YDR010CYDR010C 333 nt6.74□□□□□ -1.33
CDC43P18898 YJL107CYJL107C 1164 nt6.74□□□□□ -1.33
CDC43P18898 NSG2YNL156C 900 nt6.74□□□□□ -1.33
CDC43P18898 SCO2YBR024W 906 nt6.74□□□□□ -1.33
CDC43P18898 TIF6YPR016C 738 nt6.74□□□□□ -1.33
CDC43P18898 YFL066CYFL066C 1179 nt6.73□□□□□ -1.33
CDC43P18898 YAR028WYAR028W 705 nt6.73□□□□□ -1.33
CDC43P18898 IDP3YNL009W 1263 nt6.73□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 46.6 ms