Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 PAR32YDL173W 888 nt14.42□□□□□ -0.1
TY1B-HO13535 SAM3YPL274W 1764 nt14.41□□□□□ -0.1
TY1B-HO13535 TUB4YLR212C 1422 nt14.41□□□□□ -0.1
TY1B-HO13535 GSF2YML048W 1212 nt14.39□□□□□ -0.11
TY1B-HO13535 NUC1YJL208C 990 nt14.37□□□□□ -0.11
TY1B-HO13535 LIP1YMR298W 453 nt14.37□□□□□ -0.11
TY1B-HO13535 CDD1YLR245C 429 nt14.36□□□□□ -0.11
TY1B-HO13535 YBL086CYBL086C 1401 nt14.36□□□□□ -0.11
TY1B-HO13535 YGR259CYGR259C 441 nt14.34□□□□□ -0.11
TY1B-HO13535 MHF1YOL086W-A 273 nt14.33□□□□□ -0.12
TY1B-HO13535 YKR005CYKR005C 1578 nt14.32□□□□□ -0.12
TY1B-HO13535 BNI5YNL166C 1347 nt14.31□□□□□ -0.12
TY1B-HO13535 YMR103CYMR103C 363 nt14.31□□□□□ -0.12
TY1B-HO13535 KRE1YNL322C 942 nt14.31□□□□□ -0.12
TY1B-HO13535 SSN3YPL042C 1668 nt14.3□□□□□ -0.12
TY1B-HO13535 IRC24YIR036C 792 nt14.29□□□□□ -0.12
TY1B-HO13535 YPR126CYPR126C 309 nt14.29□□□□□ -0.12
TY1B-HO13535 YCP4YCR004C 744 nt14.29□□□□□ -0.12
TY1B-HO13535 SAM35YHR083W 990 nt14.27□□□□□ -0.12
TY1B-HO13535 YCR025CYCR025C 411 nt14.25□□□□□ -0.13
TY1B-HO13535 CTI6YPL181W 1521 nt14.25□□□□□ -0.13
TY1B-HO13535 BMT6YLR063W 1098 nt14.24□□□□□ -0.13
TY1B-HO13535 GND2YGR256W 1479 nt14.24□□□□□ -0.13
TY1B-HO13535 TOA2YKL058W 369 nt14.24□□□□□ -0.13
TY1B-HO13535 RIB7YBR153W 735 nt14.23□□□□□ -0.13
TY1B-HO13535 ACO2YJL200C 2370 nt14.23□□□□□ -0.13
TY1B-HO13535 POT1YIL160C 1254 nt14.22□□□□□ -0.13
TY1B-HO13535 PHO23YNL097C 993 nt14.18□□□□□ -0.14
TY1B-HO13535 RPT5YOR117W 1305 nt14.18□□□□□ -0.14
TY1B-HO13535 BUD20YLR074C 501 nt14.17□□□□□ -0.14
TY1B-HO13535 SAM50YNL026W 1455 nt14.14□□□□□ -0.15
TY1B-HO13535 TPS1YBR126C 1488 nt14.14□□□□□ -0.15
TY1B-HO13535 TRT2tT(CGU)K 72 nt14.14□□□□□ -0.15
TY1B-HO13535 LYS20YDL182W 1287 nt14.14□□□□□ -0.15
TY1B-HO13535 NAS2YIL007C 663 nt14.14□□□□□ -0.15
TY1B-HO13535 DBP1YPL119C 1854 nt14.14□□□□□ -0.15
TY1B-HO13535 HXT1YHR094C 1713 nt14.13□□□□□ -0.15
TY1B-HO13535 BRR1YPR057W 1026 nt14.12□□□□□ -0.15
TY1B-HO13535 NIF3YGL221C 867 nt14.11□□□□□ -0.15
TY1B-HO13535 DDI1YER143W 1287 nt14.1□□□□□ -0.15
TY1B-HO13535 OYE2YHR179W 1203 nt14.09□□□□□ -0.15
TY1B-HO13535 DAK2YFL053W 1776 nt14.07□□□□□ -0.16
TY1B-HO13535 IGD1YFR017C 588 nt14.06□□□□□ -0.16
TY1B-HO13535 HIF1YLL022C 1158 nt14.06□□□□□ -0.16
TY1B-HO13535 SAM2YDR502C 1155 nt14.03□□□□□ -0.16
TY1B-HO13535 LEU9YOR108W 1815 nt14.02□□□□□ -0.16
TY1B-HO13535 tA(AGC)DtA(AGC)D 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)FtA(AGC)F 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)GtA(AGC)G 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)HtA(AGC)H 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)JtA(AGC)J 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)K1tA(AGC)K1 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)K2tA(AGC)K2 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)LtA(AGC)L 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)M1tA(AGC)M1 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)M2tA(AGC)M2 73 nt14.01□□□□□ -0.17
TY1B-HO13535 tA(AGC)PtA(AGC)P 73 nt14.01□□□□□ -0.17
TY1B-HO13535 MSC1YML128C 1542 nt14□□□□□ -0.17
TY1B-HO13535 SWM1YDR260C 513 nt13.98□□□□□ -0.17
TY1B-HO13535 UFO1YML088W 2007 nt13.97□□□□□ -0.17
TY1B-HO13535 FLX1YIL134W 936 nt13.95□□□□□ -0.18
TY1B-HO13535 IPL1YPL209C 1104 nt13.94□□□□□ -0.18
TY1B-HO13535 FUB1YCR076C 753 nt13.93□□□□□ -0.18
TY1B-HO13535 SPE2YOL052C 1191 nt13.93□□□□□ -0.18
TY1B-HO13535 RAS2YNL098C 969 nt13.92□□□□□ -0.18
TY1B-HO13535 TGA1tA(UGC)A 73 nt13.91□□□□□ -0.18
TY1B-HO13535 tA(UGC)EtA(UGC)E 73 nt13.91□□□□□ -0.18
TY1B-HO13535 tA(UGC)GtA(UGC)G 73 nt13.91□□□□□ -0.18
TY1B-HO13535 tA(UGC)LtA(UGC)L 73 nt13.91□□□□□ -0.18
TY1B-HO13535 tA(UGC)OtA(UGC)O 73 nt13.91□□□□□ -0.18
TY1B-HO13535 OYE3YPL171C 1203 nt13.91□□□□□ -0.18
TY1B-HO13535 EAF3YPR023C 1206 nt13.9□□□□□ -0.18
TY1B-HO13535 FCY1YPR062W 477 nt13.88□□□□□ -0.19
TY1B-HO13535 YNL024CYNL024C 741 nt13.88□□□□□ -0.19
TY1B-HO13535 IML3YBR107C 738 nt13.88□□□□□ -0.19
TY1B-HO13535 SEC61YLR378C 1443 nt13.88□□□□□ -0.19
TY1B-HO13535 FLR1YBR008C 1647 nt13.88□□□□□ -0.19
TY1B-HO13535 TMA23YMR269W 636 nt13.87□□□□□ -0.19
TY1B-HO13535 SHY1YGR112W 1170 nt13.86□□□□□ -0.19
TY1B-HO13535 YER188WYER188W 720 nt13.86□□□□□ -0.19
TY1B-HO13535 YFR036W-AYFR036W-A 651 nt13.86□□□□□ -0.19
TY1B-HO13535 SPS100YHR139C 981 nt13.85□□□□□ -0.19
TY1B-HO13535 PHB2YGR231C 933 nt13.84□□□□□ -0.19
TY1B-HO13535 ADE8YDR408C 645 nt13.83□□□□□ -0.19
TY1B-HO13535 YMR007WYMR007W 381 nt13.83□□□□□ -0.19
TY1B-HO13535 GRH1YDR517W 1119 nt13.83□□□□□ -0.2
TY1B-HO13535 KAE1YKR038C 1161 nt13.83□□□□□ -0.2
TY1B-HO13535 LSM5YER146W 282 nt13.82□□□□□ -0.2
TY1B-HO13535 HOG1YLR113W 1308 nt13.81□□□□□ -0.2
TY1B-HO13535 DPS1YLL018C 1674 nt13.81□□□□□ -0.2
TY1B-HO13535 ADH3YMR083W 1128 nt13.81□□□□□ -0.2
TY1B-HO13535 ABZ2YMR289W 1125 nt13.8□□□□□ -0.2
TY1B-HO13535 MFG1YDL233W 1377 nt13.79□□□□□ -0.2
TY1B-HO13535 YOR343CYOR343C 327 nt13.79□□□□□ -0.2
TY1B-HO13535 PAU21YOR394W 495 nt13.79□□□□□ -0.2
TY1B-HO13535 PAU22YPL282C 495 nt13.79□□□□□ -0.2
TY1B-HO13535 RPL12BYDR418W 498 nt13.78□□□□□ -0.2
TY1B-HO13535 PCP1YGR101W 1041 nt13.76□□□□□ -0.21
TY1B-HO13535 SNF1YDR477W 1902 nt13.76□□□□□ -0.21
TY1B-HO13535 THP3YPR045C 1413 nt13.75□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 30.4 ms