Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PMS1P54277 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PMS1P54277 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.17■■□□□ 1.3
PMS1P54277 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.17■■□□□ 1.3
PMS1P54277 AC142381.2-201ENST00000566120 298 ntBASIC23.17■■□□□ 1.3
PMS1P54277 AC005837.3-201ENST00000612163 286 ntBASIC23.17■■□□□ 1.3
PMS1P54277 MIR6084-201ENST00000622012 110 ntBASIC23.17■■□□□ 1.3
PMS1P54277 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.17■■□□□ 1.3
PMS1P54277 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PMS1P54277 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.17■■□□□ 1.3
PMS1P54277 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.16■■□□□ 1.3
PMS1P54277 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
PMS1P54277 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.16■■□□□ 1.3
PMS1P54277 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.16■■□□□ 1.3
PMS1P54277 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.16■■□□□ 1.3
PMS1P54277 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.16■■□□□ 1.3
PMS1P54277 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.16■■□□□ 1.3
PMS1P54277 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PMS1P54277 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.15■■□□□ 1.3
PMS1P54277 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.15■■□□□ 1.3
PMS1P54277 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.15■■□□□ 1.3
PMS1P54277 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.15■■□□□ 1.3
PMS1P54277 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.15■■□□□ 1.3
PMS1P54277 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.15■■□□□ 1.3
PMS1P54277 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PMS1P54277 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
PMS1P54277 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
PMS1P54277 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
PMS1P54277 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PMS1P54277 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PMS1P54277 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.14■■□□□ 1.29
PMS1P54277 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PMS1P54277 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.14■■□□□ 1.29
PMS1P54277 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
PMS1P54277 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PMS1P54277 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PMS1P54277 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
PMS1P54277 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.13■■□□□ 1.29
PMS1P54277 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.13■■□□□ 1.29
PMS1P54277 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PMS1P54277 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.13■■□□□ 1.29
PMS1P54277 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
PMS1P54277 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PMS1P54277 PLK5-205ENST00000642079 1969 ntBASIC23.12■■□□□ 1.29
PMS1P54277 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PMS1P54277 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.12■■□□□ 1.29
PMS1P54277 AL354811.1-201ENST00000610286 706 ntBASIC23.12■■□□□ 1.29
PMS1P54277 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PMS1P54277 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PMS1P54277 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PMS1P54277 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PMS1P54277 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PMS1P54277 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PMS1P54277 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PMS1P54277 MIR638-201ENST00000385237 100 ntBASIC23.11■■□□□ 1.29
PMS1P54277 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
PMS1P54277 FXN-202ENST00000396364 980 ntTSL 5 BASIC23.11■■□□□ 1.29
PMS1P54277 AC105265.2-201ENST00000467189 838 ntBASIC23.11■■□□□ 1.29
PMS1P54277 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.11■■□□□ 1.29
PMS1P54277 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC23.11■■□□□ 1.29
PMS1P54277 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PMS1P54277 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.11■■□□□ 1.29
PMS1P54277 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
PMS1P54277 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PMS1P54277 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
PMS1P54277 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PMS1P54277 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PMS1P54277 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.1■■□□□ 1.29
PMS1P54277 EEF1DP3-203ENST00000566025 782 ntBASIC23.1■■□□□ 1.29
PMS1P54277 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PMS1P54277 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms