Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A2P08123 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.21■■□□□ 1.31
COL1A2P08123 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
COL1A2P08123 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.21■■□□□ 1.31
COL1A2P08123 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 GUSBP5-202ENST00000510805 1989 ntBASIC23.21■■□□□ 1.31
COL1A2P08123 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL1A2P08123 C11orf96-202ENST00000528572 1834 ntBASIC23.2■■□□□ 1.31
COL1A2P08123 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
COL1A2P08123 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL1A2P08123 AC091799.1-201ENST00000422823 811 ntBASIC23.2■■□□□ 1.3
COL1A2P08123 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.2■■□□□ 1.3
COL1A2P08123 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.2■■□□□ 1.3
COL1A2P08123 AC098934.4-201ENST00000564127 592 ntBASIC23.2■■□□□ 1.3
COL1A2P08123 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.19■■□□□ 1.3
COL1A2P08123 KRT18P6-201ENST00000555540 1265 ntBASIC23.19■■□□□ 1.3
COL1A2P08123 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.19■■□□□ 1.3
COL1A2P08123 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A2P08123 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A2P08123 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL1A2P08123 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 CD99P1-205ENST00000527459 561 ntBASIC23.18■■□□□ 1.3
COL1A2P08123 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.18■■□□□ 1.3
COL1A2P08123 AC092118.2-201ENST00000613495 667 ntBASIC23.18■■□□□ 1.3
COL1A2P08123 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.18■■□□□ 1.3
COL1A2P08123 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.18■■□□□ 1.3
COL1A2P08123 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL1A2P08123 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.17■■□□□ 1.3
COL1A2P08123 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.17■■□□□ 1.3
COL1A2P08123 AC233723.2-201ENST00000623798 2106 ntBASIC23.17■■□□□ 1.3
COL1A2P08123 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.17■■□□□ 1.3
COL1A2P08123 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A2P08123 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.16■■□□□ 1.3
COL1A2P08123 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A2P08123 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
COL1A2P08123 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A2P08123 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
COL1A2P08123 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.16■■□□□ 1.3
COL1A2P08123 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A2P08123 FAM21FP-204ENST00000608637 956 ntBASIC23.16■■□□□ 1.3
COL1A2P08123 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COL1A2P08123 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
COL1A2P08123 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
COL1A2P08123 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A2P08123 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
COL1A2P08123 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A2P08123 AC010980.2-201ENST00000587099 1412 ntBASIC23.16■■□□□ 1.3
COL1A2P08123 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL1A2P08123 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.15■■□□□ 1.3
COL1A2P08123 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL1A2P08123 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.15■■□□□ 1.3
COL1A2P08123 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL1A2P08123 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL1A2P08123 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.15■■□□□ 1.3
COL1A2P08123 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.15■■□□□ 1.3
COL1A2P08123 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
COL1A2P08123 ECEL1P1-201ENST00000373592 1742 ntBASIC23.15■■□□□ 1.3
COL1A2P08123 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
COL1A2P08123 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL1A2P08123 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.15■■□□□ 1.3
COL1A2P08123 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A2P08123 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.14■■□□□ 1.3
COL1A2P08123 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A2P08123 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.14■■□□□ 1.3
COL1A2P08123 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A2P08123 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A2P08123 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A2P08123 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A2P08123 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL1A2P08123 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL1A2P08123 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A2P08123 ABHD17AP1-201ENST00000358206 933 ntBASIC23.14■■□□□ 1.29
COL1A2P08123 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.14■■□□□ 1.29
COL1A2P08123 BX276092.2-201ENST00000417668 665 ntBASIC23.14■■□□□ 1.29
COL1A2P08123 CDV3P1-201ENST00000471403 739 ntBASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms