Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 AP004607.7-201ENST00000527152 1677 ntBASIC17.23■□□□□ 0.35
TMEM56-RWDD3S4R434 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MIR6724-1-201ENST00000616420 92 ntBASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MIR6724-2-201ENST00000616483 92 ntBASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MIR6724-4-201ENST00000617390 92 ntBASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 MIR6724-3-201ENST00000622482 92 ntBASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM56-RWDD3S4R434 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 TSPY9P-201ENST00000440215 945 ntBASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 TSPY11P-201ENST00000442607 1045 ntBASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM56-RWDD3S4R434 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 MIR3181-201ENST00000578512 73 ntBASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM56-RWDD3S4R434 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 AC239859.2-201ENST00000444165 318 ntBASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 AC099791.2-201ENST00000605725 427 ntBASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEM56-RWDD3S4R434 AC007952.6-201ENST00000573168 2673 ntBASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 AC003957.1-201ENST00000625108 2673 ntBASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms