Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 YBX1P1-201ENST00000445822 960 ntBASIC20.33■□□□□ 0.85
KRT78Q8N1N4 AC079140.4-201ENST00000507448 529 ntBASIC20.33■□□□□ 0.85
KRT78Q8N1N4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.33■□□□□ 0.85
KRT78Q8N1N4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
KRT78Q8N1N4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
KRT78Q8N1N4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
KRT78Q8N1N4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
KRT78Q8N1N4 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT78Q8N1N4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT78Q8N1N4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms