Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 HOYDL227C 1761 nt4.04□□□□□ -1.76
YLR040CQ07988 MAG2YLR427W 2013 nt4.04□□□□□ -1.76
YLR040CQ07988 SKO1YNL167C 1944 nt4.03□□□□□ -1.76
YLR040CQ07988 NUP133YKR082W 3474 nt4.03□□□□□ -1.76
YLR040CQ07988 Q0032Q0032 291 nt4.03□□□□□ -1.76
YLR040CQ07988 YDL240C-AYDL240C-A 138 nt4.03□□□□□ -1.76
YLR040CQ07988 YDR355CYDR355C 303 nt4.03□□□□□ -1.76
YLR040CQ07988 YGR190CYGR190C 366 nt4.03□□□□□ -1.76
YLR040CQ07988 PXR1YGR280C 816 nt4.03□□□□□ -1.76
YLR040CQ07988 YHR182C-AYHR182C-A 474 nt4.03□□□□□ -1.76
YLR040CQ07988 YJL127C-BYJL127C-B 159 nt4.03□□□□□ -1.76
YLR040CQ07988 YAR075WYAR075W 474 nt4.03□□□□□ -1.76
YLR040CQ07988 YPR050CYPR050C 414 nt4.03□□□□□ -1.76
YLR040CQ07988 HPA2YPR193C 471 nt4.03□□□□□ -1.76
YLR040CQ07988 YKR078WYKR078W 1758 nt4.03□□□□□ -1.76
YLR040CQ07988 ARP5YNL059C 2268 nt4.02□□□□□ -1.77
YLR040CQ07988 PEX30YLR324W 1572 nt4.02□□□□□ -1.77
YLR040CQ07988 YMR221CYMR221C 1515 nt4.02□□□□□ -1.77
YLR040CQ07988 SAF1YBR280C 1914 nt4.02□□□□□ -1.77
YLR040CQ07988 GPI19YDR437W 423 nt4.02□□□□□ -1.77
YLR040CQ07988 YER135CYER135C 393 nt4.02□□□□□ -1.77
YLR040CQ07988 BIG1YHR101C 1008 nt4.02□□□□□ -1.77
YLR040CQ07988 RSM25YIL093C 795 nt4.02□□□□□ -1.77
YLR040CQ07988 BNA1YJR025C 534 nt4.02□□□□□ -1.77
YLR040CQ07988 YKL070WYKL070W 510 nt4.02□□□□□ -1.77
YLR040CQ07988 YLL044WYLL044W 447 nt4.02□□□□□ -1.77
YLR040CQ07988 NNT1YLR285W 786 nt4.02□□□□□ -1.77
YLR040CQ07988 RPS1BYML063W 768 nt4.02□□□□□ -1.77
YLR040CQ07988 RPL18BYNL301C 561 nt4.02□□□□□ -1.77
YLR040CQ07988 TMC1YOR052C 453 nt4.02□□□□□ -1.77
YLR040CQ07988 YOR392WYOR392W 444 nt4.02□□□□□ -1.77
YLR040CQ07988 YPL025CYPL025C 558 nt4.02□□□□□ -1.77
YLR040CQ07988 TPK2YPL203W 1143 nt4.02□□□□□ -1.77
YLR040CQ07988 CIT1YNR001C 1440 nt4.02□□□□□ -1.77
YLR040CQ07988 SLY41YOR307C 1362 nt4.02□□□□□ -1.77
YLR040CQ07988 FAA1YOR317W 2103 nt4.01□□□□□ -1.77
YLR040CQ07988 STV1YMR054W 2673 nt4.01□□□□□ -1.77
YLR040CQ07988 YPR148CYPR148C 1308 nt4.01□□□□□ -1.77
YLR040CQ07988 PRP11YDL043C 801 nt4.01□□□□□ -1.77
YLR040CQ07988 RPL17BYJL177W 555 nt4.01□□□□□ -1.77
YLR040CQ07988 YKL065W-AYKL065W-A 222 nt4.01□□□□□ -1.77
YLR040CQ07988 AIM29YKR074W 468 nt4.01□□□□□ -1.77
YLR040CQ07988 CTK3YML112W 891 nt4.01□□□□□ -1.77
YLR040CQ07988 YNL089CYNL089C 477 nt4.01□□□□□ -1.77
YLR040CQ07988 YOR231C-AYOR231C-A 201 nt4.01□□□□□ -1.77
YLR040CQ07988 snR54snR54 86 nt4.01□□□□□ -1.77
YLR040CQ07988 HMG1YML075C 3165 nt4.01□□□□□ -1.77
YLR040CQ07988 YBP2YGL060W 1926 nt4.01□□□□□ -1.77
YLR040CQ07988 GDI1YER136W 1356 nt4.01□□□□□ -1.77
YLR040CQ07988 ALR2YFL050C 2577 nt4.01□□□□□ -1.77
YLR040CQ07988 ASI3YNL008C 2031 nt4□□□□□ -1.77
YLR040CQ07988 PHO84YML123C 1764 nt4□□□□□ -1.77
YLR040CQ07988 KIC1YHR102W 3243 nt4□□□□□ -1.77
YLR040CQ07988 RPG1YBR079C 2895 nt4□□□□□ -1.77
YLR040CQ07988 VAB2YEL005C 849 nt4□□□□□ -1.77
YLR040CQ07988 TDA2YER071C 381 nt4□□□□□ -1.77
YLR040CQ07988 YAP3YHL009C 993 nt4□□□□□ -1.77
YLR040CQ07988 FYV4YHR059W 393 nt4□□□□□ -1.77
YLR040CQ07988 YIL165CYIL165C 360 nt4□□□□□ -1.77
YLR040CQ07988 YML031C-AYML031C-A 336 nt4□□□□□ -1.77
YLR040CQ07988 RAD52YML032C 1416 nt4□□□□□ -1.77
YLR040CQ07988 NAM2YLR382C 2685 nt4□□□□□ -1.77
YLR040CQ07988 PTR3YFR029W 2037 nt4□□□□□ -1.77
YLR040CQ07988 SRS2YJL092W 3525 nt4□□□□□ -1.77
YLR040CQ07988 UBP6YFR010W 1500 nt4□□□□□ -1.77
YLR040CQ07988 YPL260WYPL260W 1656 nt4□□□□□ -1.77
YLR040CQ07988 SEC27YGL137W 2670 nt3.99□□□□□ -1.77
YLR040CQ07988 SSH4YKL124W 1740 nt3.99□□□□□ -1.77
YLR040CQ07988 DSL1YNL258C 2265 nt3.99□□□□□ -1.77
YLR040CQ07988 RPC11YDR045C 333 nt3.99□□□□□ -1.77
YLR040CQ07988 BNA6YFR047C 888 nt3.99□□□□□ -1.77
YLR040CQ07988 SAE2YGL175C 1038 nt3.99□□□□□ -1.77
YLR040CQ07988 YIL024CYIL024C 570 nt3.99□□□□□ -1.77
YLR040CQ07988 REE1YJL217W 597 nt3.99□□□□□ -1.77
YLR040CQ07988 YNL150WYNL150W 408 nt3.99□□□□□ -1.77
YLR040CQ07988 MCM16YPR046W 546 nt3.99□□□□□ -1.77
YLR040CQ07988 PIN3YPR154W 648 nt3.99□□□□□ -1.77
YLR040CQ07988 THS1YIL078W 2205 nt3.99□□□□□ -1.77
YLR040CQ07988 BCK2YER167W 2556 nt3.99□□□□□ -1.77
YLR040CQ07988 PDR12YPL058C 4536 nt3.98□□□□□ -1.77
YLR040CQ07988 FAR8YMR029C 1572 nt3.98□□□□□ -1.77
YLR040CQ07988 YSH1YLR277C 2340 nt3.98□□□□□ -1.77
YLR040CQ07988 VHR1YIL056W 1923 nt3.98□□□□□ -1.77
YLR040CQ07988 HNT1YDL125C 477 nt3.98□□□□□ -1.77
YLR040CQ07988 BSC2YDR275W 708 nt3.98□□□□□ -1.77
YLR040CQ07988 RTS3YGR161C 792 nt3.98□□□□□ -1.77
YLR040CQ07988 FMC1YIL098C 468 nt3.98□□□□□ -1.77
YLR040CQ07988 SWC7YLR385C 399 nt3.98□□□□□ -1.77
YLR040CQ07988 YOR282WYOR282W 321 nt3.98□□□□□ -1.77
YLR040CQ07988 YOR379CYOR379C 339 nt3.98□□□□□ -1.77
YLR040CQ07988 TOG1YER184C 2385 nt3.98□□□□□ -1.77
YLR040CQ07988 ALE1YOR175C 1860 nt3.98□□□□□ -1.77
YLR040CQ07988 UPC2YDR213W 2742 nt3.98□□□□□ -1.77
YLR040CQ07988 URC2YDR520C 2319 nt3.98□□□□□ -1.77
YLR040CQ07988 PMC1YGL006W 3522 nt3.98□□□□□ -1.77
YLR040CQ07988 GAL80YML051W 1308 nt3.97□□□□□ -1.77
YLR040CQ07988 BOI2YER114C 3123 nt3.97□□□□□ -1.77
YLR040CQ07988 GCD10YNL062C 1437 nt3.97□□□□□ -1.77
YLR040CQ07988 OSH2YDL019C 3852 nt3.97□□□□□ -1.77
YLR040CQ07988 YER034WYER034W 558 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms