Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 PET100YDR079W 336 nt3.33□□□□□ -1.88
BRF1P29056 YEL010WYEL010W 351 nt3.33□□□□□ -1.88
BRF1P29056 YEL075CYEL075C 369 nt3.33□□□□□ -1.88
BRF1P29056 GEP7YGL057C 864 nt3.33□□□□□ -1.88
BRF1P29056 AGE2YIL044C 897 nt3.33□□□□□ -1.88
BRF1P29056 VMA5YKL080W 1179 nt3.33□□□□□ -1.88
BRF1P29056 YSF3YNL138W-A 258 nt3.33□□□□□ -1.88
BRF1P29056 MRPL17YNL252C 846 nt3.33□□□□□ -1.88
BRF1P29056 BUD21YOR078W 645 nt3.33□□□□□ -1.88
BRF1P29056 GRX7YBR014C 612 nt3.33□□□□□ -1.88
BRF1P29056 YPR027CYPR027C 834 nt3.33□□□□□ -1.88
BRF1P29056 ITC1YGL133W 3795 nt3.33□□□□□ -1.88
BRF1P29056 MED1YPR070W 1701 nt3.33□□□□□ -1.88
BRF1P29056 EXO5YBR163W 1758 nt3.33□□□□□ -1.88
BRF1P29056 RED1YLR263W 2484 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)DtK(UUU)D 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)G1tK(UUU)G1 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)G2tK(UUU)G2 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)KtK(UUU)K 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)LtK(UUU)L 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)OtK(UUU)O 73 nt3.32□□□□□ -1.88
BRF1P29056 tK(UUU)PtK(UUU)P 73 nt3.32□□□□□ -1.88
BRF1P29056 YGL204CYGL204C 306 nt3.32□□□□□ -1.88
BRF1P29056 YGR017WYGR017W 894 nt3.32□□□□□ -1.88
BRF1P29056 POL32YJR043C 1053 nt3.32□□□□□ -1.88
BRF1P29056 RPS21AYKR057W 264 nt3.32□□□□□ -1.88
BRF1P29056 REC102YLR329W 795 nt3.32□□□□□ -1.88
BRF1P29056 YBL028CYBL028C 321 nt3.32□□□□□ -1.88
BRF1P29056 PEX15YOL044W 1152 nt3.32□□□□□ -1.88
BRF1P29056 KRE2YDR483W 1329 nt3.32□□□□□ -1.88
BRF1P29056 NDT80YHR124W 1884 nt3.32□□□□□ -1.88
BRF1P29056 CHA4YLR098C 1947 nt3.32□□□□□ -1.88
BRF1P29056 SLS1YLR139C 1932 nt3.32□□□□□ -1.88
BRF1P29056 FRE2YKL220C 2136 nt3.32□□□□□ -1.88
BRF1P29056 STU2YLR045C 2667 nt3.32□□□□□ -1.88
BRF1P29056 ARG5,6YER069W 2592 nt3.31□□□□□ -1.88
BRF1P29056 SKP2YNL311C 2292 nt3.31□□□□□ -1.88
BRF1P29056 SLY41YOR307C 1362 nt3.31□□□□□ -1.88
BRF1P29056 RPL22BYFL034C-A 369 nt3.31□□□□□ -1.88
BRF1P29056 RPL24BYGR148C 468 nt3.31□□□□□ -1.88
BRF1P29056 YLR076CYLR076C 423 nt3.31□□□□□ -1.88
BRF1P29056 GPN3YLR243W 819 nt3.31□□□□□ -1.88
BRF1P29056 RPN13YLR421C 471 nt3.31□□□□□ -1.88
BRF1P29056 YMR087WYMR087W 855 nt3.31□□□□□ -1.88
BRF1P29056 AAR2YBL074C 1068 nt3.31□□□□□ -1.88
BRF1P29056 RSN1YMR266W 2862 nt3.31□□□□□ -1.88
BRF1P29056 DSE4YNR067C 3354 nt3.31□□□□□ -1.88
BRF1P29056 GCD2YGR083C 1956 nt3.31□□□□□ -1.88
BRF1P29056 SRP68YPL243W 1800 nt3.3□□□□□ -1.88
BRF1P29056 AI4Q0065 1671 nt3.3□□□□□ -1.88
BRF1P29056 RTG3YBL103C 1461 nt3.3□□□□□ -1.88
BRF1P29056 JIP5YPR169W 1479 nt3.3□□□□□ -1.88
BRF1P29056 VPS9YML097C 1356 nt3.3□□□□□ -1.88
BRF1P29056 SRB7YDR308C 423 nt3.3□□□□□ -1.88
BRF1P29056 MPS2YGL075C 1164 nt3.3□□□□□ -1.88
BRF1P29056 RGI2YIL057C 495 nt3.3□□□□□ -1.88
BRF1P29056 CCE1YKL011C 1062 nt3.3□□□□□ -1.88
BRF1P29056 YKL131WYKL131W 522 nt3.3□□□□□ -1.88
BRF1P29056 YKR070WYKR070W 1059 nt3.3□□□□□ -1.88
BRF1P29056 YAL064WYAL064W 285 nt3.3□□□□□ -1.88
BRF1P29056 YLR347W-AYLR347W-A 141 nt3.3□□□□□ -1.88
BRF1P29056 TEM1YML064C 738 nt3.3□□□□□ -1.88
BRF1P29056 TGL3YMR313C 1929 nt3.29□□□□□ -1.88
BRF1P29056 EAP1YKL204W 1899 nt3.29□□□□□ -1.88
BRF1P29056 YFR010W-AYFR010W-A 189 nt3.29□□□□□ -1.88
BRF1P29056 RFA3YJL173C 369 nt3.29□□□□□ -1.88
BRF1P29056 APC9YLR102C 798 nt3.29□□□□□ -1.88
BRF1P29056 YLR339CYLR339C 552 nt3.29□□□□□ -1.88
BRF1P29056 POL30YBR088C 777 nt3.29□□□□□ -1.88
BRF1P29056 YDL050CYDL050C 372 nt3.28□□□□□ -1.88
BRF1P29056 SMD3YLR147C 306 nt3.28□□□□□ -1.88
BRF1P29056 DLT1YMR126C 1029 nt3.28□□□□□ -1.88
BRF1P29056 YMR158C-AYMR158C-A 138 nt3.28□□□□□ -1.88
BRF1P29056 RPL20AYMR242C 519 nt3.28□□□□□ -1.88
BRF1P29056 RPB8YOR224C 441 nt3.28□□□□□ -1.88
BRF1P29056 SOK1YDR006C 2706 nt3.28□□□□□ -1.88
BRF1P29056 NUP60YAR002W 1620 nt3.28□□□□□ -1.88
BRF1P29056 YCK2YNL154C 1641 nt3.28□□□□□ -1.88
BRF1P29056 SEC27YGL137W 2670 nt3.28□□□□□ -1.88
BRF1P29056 SRC1YML034W 2505 nt3.28□□□□□ -1.88
BRF1P29056 BNI4YNL233W 2679 nt3.27□□□□□ -1.89
BRF1P29056 YDL157CYDL157C 357 nt3.27□□□□□ -1.89
BRF1P29056 DPP1YDR284C 870 nt3.27□□□□□ -1.89
BRF1P29056 YDR320W-BYDR320W-B 138 nt3.27□□□□□ -1.89
BRF1P29056 YGR073CYGR073C 372 nt3.27□□□□□ -1.89
BRF1P29056 YHR180WYHR180W 492 nt3.27□□□□□ -1.89
BRF1P29056 RPL17AYKL180W 555 nt3.27□□□□□ -1.89
BRF1P29056 BET5YML077W 480 nt3.27□□□□□ -1.89
BRF1P29056 PEX34YCL056C 435 nt3.27□□□□□ -1.89
BRF1P29056 HSE1YHL002W 1359 nt3.26□□□□□ -1.89
BRF1P29056 COM2YER130C 1332 nt3.26□□□□□ -1.89
BRF1P29056 tF(GAA)DtF(GAA)D 73 nt3.26□□□□□ -1.89
BRF1P29056 tF(GAA)NtF(GAA)N 73 nt3.26□□□□□ -1.89
BRF1P29056 RPN9YDR427W 1182 nt3.26□□□□□ -1.89
BRF1P29056 ERG25YGR060W 930 nt3.26□□□□□ -1.89
BRF1P29056 YGR160WYGR160W 612 nt3.26□□□□□ -1.89
BRF1P29056 TPM1YNL079C 600 nt3.26□□□□□ -1.89
BRF1P29056 YNL226WYNL226W 411 nt3.26□□□□□ -1.89
BRF1P29056 YNL320WYNL320W 855 nt3.26□□□□□ -1.89
BRF1P29056 YOR097CYOR097C 528 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 52.5 ms