Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC32.05■■■□□ 2.72
AFAP1Q8N556 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC32.05■■■□□ 2.72
AFAP1Q8N556 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
AFAP1Q8N556 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
AFAP1Q8N556 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
AFAP1Q8N556 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC32.05■■■□□ 2.72
AFAP1Q8N556 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
AFAP1Q8N556 AC061975.6-201ENST00000579045 1553 ntBASIC32.04■■■□□ 2.72
AFAP1Q8N556 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
AFAP1Q8N556 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 LSM12P1-201ENST00000411836 588 ntBASIC32.04■■■□□ 2.72
AFAP1Q8N556 AL355472.2-201ENST00000422958 438 ntBASIC32.04■■■□□ 2.72
AFAP1Q8N556 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
AFAP1Q8N556 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
AFAP1Q8N556 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
AFAP1Q8N556 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
AFAP1Q8N556 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
AFAP1Q8N556 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
AFAP1Q8N556 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC32.02■■■□□ 2.72
AFAP1Q8N556 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
AFAP1Q8N556 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
AFAP1Q8N556 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC32.02■■■□□ 2.72
AFAP1Q8N556 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC32.01■■■□□ 2.72
AFAP1Q8N556 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
AFAP1Q8N556 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC32.01■■■□□ 2.71
AFAP1Q8N556 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32■■■□□ 2.71
AFAP1Q8N556 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32■■■□□ 2.71
AFAP1Q8N556 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
AFAP1Q8N556 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
AFAP1Q8N556 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC32■■■□□ 2.71
AFAP1Q8N556 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32■■■□□ 2.71
AFAP1Q8N556 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC32■■■□□ 2.71
AFAP1Q8N556 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
AFAP1Q8N556 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
AFAP1Q8N556 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
AFAP1Q8N556 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC31.99■■■□□ 2.71
AFAP1Q8N556 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.99■■■□□ 2.71
AFAP1Q8N556 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
AFAP1Q8N556 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
AFAP1Q8N556 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
AFAP1Q8N556 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
AFAP1Q8N556 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC31.98■■■□□ 2.71
AFAP1Q8N556 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC31.98■■■□□ 2.71
AFAP1Q8N556 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.98■■■□□ 2.71
AFAP1Q8N556 ECEL1P3-201ENST00000427961 737 ntBASIC31.98■■■□□ 2.71
AFAP1Q8N556 CD44-222ENST00000526025 1052 ntTSL 2 BASIC31.98■■■□□ 2.71
AFAP1Q8N556 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
AFAP1Q8N556 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
AFAP1Q8N556 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
AFAP1Q8N556 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 AC137767.1-201ENST00000602918 1920 ntBASIC31.97■■■□□ 2.71
AFAP1Q8N556 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
AFAP1Q8N556 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
AFAP1Q8N556 RPPH1-201ENST00000516869 333 ntBASIC31.97■■■□□ 2.71
AFAP1Q8N556 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 MIR4497-201ENST00000583208 89 ntBASIC31.97■■■□□ 2.71
AFAP1Q8N556 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
AFAP1Q8N556 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.97■■■□□ 2.71
AFAP1Q8N556 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
AFAP1Q8N556 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC31.96■■■□□ 2.71
AFAP1Q8N556 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
AFAP1Q8N556 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
AFAP1Q8N556 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
AFAP1Q8N556 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC31.95■■■□□ 2.71
AFAP1Q8N556 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
AFAP1Q8N556 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.95■■■□□ 2.71
AFAP1Q8N556 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
AFAP1Q8N556 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.95■■■□□ 2.71
AFAP1Q8N556 RNF121-214ENST00000533380 870 ntTSL 3 BASIC31.95■■■□□ 2.71
AFAP1Q8N556 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC31.95■■■□□ 2.71
AFAP1Q8N556 AC060766.5-201ENST00000590539 871 ntBASIC31.95■■■□□ 2.71
AFAP1Q8N556 Z99916.2-201ENST00000604037 246 ntBASIC31.95■■■□□ 2.71
AFAP1Q8N556 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
AFAP1Q8N556 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC31.94■■■□□ 2.7
AFAP1Q8N556 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
AFAP1Q8N556 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
AFAP1Q8N556 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
AFAP1Q8N556 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC31.93■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms