Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 REE1YJL217W 597 nt5.09□□□□□ -1.59
MSH4P40965 PIR3YKL163W 978 nt5.09□□□□□ -1.59
MSH4P40965 YMR052C-AYMR052C-A 366 nt5.09□□□□□ -1.59
MSH4P40965 YMR254CYMR254C 309 nt5.09□□□□□ -1.59
MSH4P40965 YNL109WYNL109W 546 nt5.09□□□□□ -1.59
MSH4P40965 BUD6YLR319C 2367 nt5.09□□□□□ -1.59
MSH4P40965 DHR2YKL078W 2208 nt5.09□□□□□ -1.59
MSH4P40965 ENP2YGR145W 2124 nt5.09□□□□□ -1.59
MSH4P40965 SAT4YCR008W 1812 nt5.09□□□□□ -1.6
MSH4P40965 TAF12YDR145W 1620 nt5.08□□□□□ -1.6
MSH4P40965 CHK1YBR274W 1584 nt5.08□□□□□ -1.6
MSH4P40965 MET12YPL023C 1974 nt5.08□□□□□ -1.6
MSH4P40965 IES5YER092W 378 nt5.08□□□□□ -1.6
MSH4P40965 LOC1YFR001W 615 nt5.08□□□□□ -1.6
MSH4P40965 ASG7YJL170C 630 nt5.08□□□□□ -1.6
MSH4P40965 LSO1YJR005C-A 282 nt5.08□□□□□ -1.6
MSH4P40965 YAR053WYAR053W 297 nt5.08□□□□□ -1.6
MSH4P40965 UBX4YMR067C 1251 nt5.08□□□□□ -1.6
MSH4P40965 IMP1YMR150C 573 nt5.08□□□□□ -1.6
MSH4P40965 ATG3YNR007C 933 nt5.08□□□□□ -1.6
MSH4P40965 DSS4YPR017C 432 nt5.08□□□□□ -1.6
MSH4P40965 NGG1YDR176W 2109 nt5.07□□□□□ -1.6
MSH4P40965 HNT2YDR305C 654 nt5.07□□□□□ -1.6
MSH4P40965 YER181CYER181C 324 nt5.07□□□□□ -1.6
MSH4P40965 YJL175WYJL175W 513 nt5.07□□□□□ -1.6
MSH4P40965 YJR020WYJR020W 333 nt5.07□□□□□ -1.6
MSH4P40965 YLR101CYLR101C 396 nt5.07□□□□□ -1.6
MSH4P40965 YPT7YML001W 627 nt5.07□□□□□ -1.6
MSH4P40965 ATP11YNL315C 957 nt5.07□□□□□ -1.6
MSH4P40965 DCS2YOR173W 1062 nt5.07□□□□□ -1.6
MSH4P40965 YAR1YPL239W 603 nt5.07□□□□□ -1.6
MSH4P40965 YPR016W-AYPR016W-A 261 nt5.07□□□□□ -1.6
MSH4P40965 NOP56YLR197W 1515 nt5.07□□□□□ -1.6
MSH4P40965 ZPR1YGR211W 1461 nt5.07□□□□□ -1.6
MSH4P40965 ARP4YJL081C 1470 nt5.07□□□□□ -1.6
MSH4P40965 JJJ1YNL227C 1773 nt5.06□□□□□ -1.6
MSH4P40965 TRS85YDR108W 2097 nt5.06□□□□□ -1.6
MSH4P40965 AIM14YGL160W 1713 nt5.06□□□□□ -1.6
MSH4P40965 TRM12YML005W 1389 nt5.06□□□□□ -1.6
MSH4P40965 PAH1YMR165C 2589 nt5.06□□□□□ -1.6
MSH4P40965 FIN1YDR130C 876 nt5.06□□□□□ -1.6
MSH4P40965 DPP1YDR284C 870 nt5.06□□□□□ -1.6
MSH4P40965 THO1YER063W 657 nt5.06□□□□□ -1.6
MSH4P40965 RGI1YER067W 486 nt5.06□□□□□ -1.6
MSH4P40965 YHL002C-AYHL002C-A 489 nt5.06□□□□□ -1.6
MSH4P40965 SEC22YLR268W 645 nt5.06□□□□□ -1.6
MSH4P40965 FOL3YMR113W 1284 nt5.06□□□□□ -1.6
MSH4P40965 DYN3YMR299C 939 nt5.06□□□□□ -1.6
MSH4P40965 YMR310CYMR310C 954 nt5.06□□□□□ -1.6
MSH4P40965 RLP7YNL002C 969 nt5.06□□□□□ -1.6
MSH4P40965 RBL2YOR265W 321 nt5.06□□□□□ -1.6
MSH4P40965 YBR051WYBR051W 351 nt5.06□□□□□ -1.6
MSH4P40965 GDT1YBR187W 843 nt5.06□□□□□ -1.6
MSH4P40965 PRS5YOL061W 1491 nt5.06□□□□□ -1.6
MSH4P40965 PLM2YDR501W 1566 nt5.05□□□□□ -1.6
MSH4P40965 HOM3YER052C 1584 nt5.05□□□□□ -1.6
MSH4P40965 OPT2YPR194C 2634 nt5.05□□□□□ -1.6
MSH4P40965 APA2YDR530C 978 nt5.05□□□□□ -1.6
MSH4P40965 RMD6YEL072W 696 nt5.05□□□□□ -1.6
MSH4P40965 MAG1YER142C 891 nt5.05□□□□□ -1.6
MSH4P40965 YAL047W-AYAL047W-A 330 nt5.05□□□□□ -1.6
MSH4P40965 CNB1YKL190W 528 nt5.05□□□□□ -1.6
MSH4P40965 YAL065CYAL065C 387 nt5.05□□□□□ -1.6
MSH4P40965 HRI1YLR301W 735 nt5.05□□□□□ -1.6
MSH4P40965 YOR293C-AYOR293C-A 150 nt5.05□□□□□ -1.6
MSH4P40965 MRPL40YPL173W 894 nt5.05□□□□□ -1.6
MSH4P40965 MDM30YLR368W 1797 nt5.05□□□□□ -1.6
MSH4P40965 VAC7YNL054W 3498 nt5.04□□□□□ -1.6
MSH4P40965 NOP12YOL041C 1380 nt5.04□□□□□ -1.6
MSH4P40965 SPH1YLR313C 1593 nt5.04□□□□□ -1.6
MSH4P40965 BUD27YFL023W 2391 nt5.04□□□□□ -1.6
MSH4P40965 snR9snR9 187 nt5.04□□□□□ -1.6
MSH4P40965 YDR545C-AYDR545C-A 480 nt5.04□□□□□ -1.6
MSH4P40965 YEL077W-AYEL077W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 SLX8YER116C 825 nt5.04□□□□□ -1.6
MSH4P40965 YER190C-BYER190C-B 483 nt5.04□□□□□ -1.6
MSH4P40965 YFL068WYFL068W 483 nt5.04□□□□□ -1.6
MSH4P40965 YGR296C-BYGR296C-B 483 nt5.04□□□□□ -1.6
MSH4P40965 ECM34YHL043W 513 nt5.04□□□□□ -1.6
MSH4P40965 YHL050W-AYHL050W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YHR219C-AYHR219C-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YIL177W-AYIL177W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YJL225W-AYJL225W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 SRP40YKR092C 1221 nt5.04□□□□□ -1.6
MSH4P40965 YLL066W-AYLL066W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YLL067W-AYLL067W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 AHP1YLR109W 531 nt5.04□□□□□ -1.6
MSH4P40965 NKP2YLR315W 462 nt5.04□□□□□ -1.6
MSH4P40965 YLR466C-AYLR466C-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YLR467C-AYLR467C-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YML133W-BYML133W-B 483 nt5.04□□□□□ -1.6
MSH4P40965 TOM22YNL131W 459 nt5.04□□□□□ -1.6
MSH4P40965 YNL339W-BYNL339W-B 483 nt5.04□□□□□ -1.6
MSH4P40965 YGK3YOL128C 1128 nt5.04□□□□□ -1.6
MSH4P40965 YBL113W-AYBL113W-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YOR396C-AYOR396C-A 483 nt5.04□□□□□ -1.6
MSH4P40965 YPL283W-BYPL283W-B 483 nt5.04□□□□□ -1.6
MSH4P40965 MCM16YPR046W 546 nt5.04□□□□□ -1.6
MSH4P40965 YPR204C-AYPR204C-A 483 nt5.04□□□□□ -1.6
MSH4P40965 SWP82YFL049W 1872 nt5.04□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 42.6 ms