Protein–RNA interactions for Protein: P29056

BRF1, Transcription factor IIIB 70 kDa subunit, yeastyeast

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRF1P29056 RUF5-1RUF5-1 710 nt3.58□□□□□ -1.84
BRF1P29056 RUF5-2RUF5-2 710 nt3.58□□□□□ -1.84
BRF1P29056 TRM112YNR046W 408 nt3.58□□□□□ -1.84
BRF1P29056 HNT3YOR258W 654 nt3.58□□□□□ -1.84
BRF1P29056 TAF1YGR274C 3201 nt3.58□□□□□ -1.84
BRF1P29056 YDL199CYDL199C 2064 nt3.58□□□□□ -1.84
BRF1P29056 RAD55YDR076W 1221 nt3.57□□□□□ -1.84
BRF1P29056 YDR193WYDR193W 399 nt3.57□□□□□ -1.84
BRF1P29056 GIC2YDR309C 1152 nt3.57□□□□□ -1.84
BRF1P29056 SMT3YDR510W 306 nt3.57□□□□□ -1.84
BRF1P29056 TCA17YEL048C 459 nt3.57□□□□□ -1.84
BRF1P29056 RTT109YLL002W 1311 nt3.57□□□□□ -1.84
BRF1P29056 DUG3YNL191W 1074 nt3.57□□□□□ -1.84
BRF1P29056 YNR066CYNR066C 1311 nt3.57□□□□□ -1.84
BRF1P29056 MSH2YOL090W 2895 nt3.57□□□□□ -1.84
BRF1P29056 CIN1YOR349W 3045 nt3.57□□□□□ -1.84
BRF1P29056 PBI1YPL272C 1554 nt3.57□□□□□ -1.84
BRF1P29056 DOA4YDR069C 2781 nt3.57□□□□□ -1.84
BRF1P29056 VIP1YLR410W 3441 nt3.56□□□□□ -1.84
BRF1P29056 TRX3YCR083W 384 nt3.56□□□□□ -1.84
BRF1P29056 DET1YDR051C 1005 nt3.56□□□□□ -1.84
BRF1P29056 YFR032C-BYFR032C-B 264 nt3.56□□□□□ -1.84
BRF1P29056 YBR292CYBR292C 372 nt3.56□□□□□ -1.84
BRF1P29056 RPN1YHR027C 2982 nt3.55□□□□□ -1.84
BRF1P29056 YPR022CYPR022C 3402 nt3.55□□□□□ -1.84
BRF1P29056 MON1YGL124C 1935 nt3.55□□□□□ -1.84
BRF1P29056 MRPL32YCR003W 552 nt3.55□□□□□ -1.84
BRF1P29056 TSC13YDL015C 933 nt3.55□□□□□ -1.84
BRF1P29056 YER165C-AYER165C-A 357 nt3.55□□□□□ -1.84
BRF1P29056 YGR161W-CYGR161W-C 279 nt3.55□□□□□ -1.84
BRF1P29056 tV(CAC)DtV(CAC)D 73 nt3.55□□□□□ -1.84
BRF1P29056 tV(CAC)HtV(CAC)H 73 nt3.55□□□□□ -1.84
BRF1P29056 ALB1YJL122W 528 nt3.55□□□□□ -1.84
BRF1P29056 MAK16YAL025C 921 nt3.55□□□□□ -1.84
BRF1P29056 HYM1YKL189W 1200 nt3.55□□□□□ -1.84
BRF1P29056 ERG2YMR202W 669 nt3.55□□□□□ -1.84
BRF1P29056 ATG34YOL083W 1239 nt3.55□□□□□ -1.84
BRF1P29056 PIN3YPR154W 648 nt3.55□□□□□ -1.84
BRF1P29056 YDL180WYDL180W 1644 nt3.55□□□□□ -1.84
BRF1P29056 PIN4YBL051C 2007 nt3.54□□□□□ -1.84
BRF1P29056 SLI1YGR212W 1407 nt3.54□□□□□ -1.84
BRF1P29056 SUP45YBR143C 1314 nt3.54□□□□□ -1.84
BRF1P29056 GRX2YDR513W 432 nt3.54□□□□□ -1.84
BRF1P29056 YDR535CYDR535C 501 nt3.54□□□□□ -1.84
BRF1P29056 YFL051CYFL051C 483 nt3.54□□□□□ -1.84
BRF1P29056 PFS1YHR185C 714 nt3.54□□□□□ -1.84
BRF1P29056 TMA19YKL056C 504 nt3.54□□□□□ -1.84
BRF1P29056 SSN8YNL025C 972 nt3.54□□□□□ -1.84
BRF1P29056 DER1YBR201W 636 nt3.54□□□□□ -1.84
BRF1P29056 YJR061WYJR061W 2808 nt3.54□□□□□ -1.84
BRF1P29056 VPS3YDR495C 3036 nt3.54□□□□□ -1.84
BRF1P29056 SPO71YDR104C 3738 nt3.54□□□□□ -1.84
BRF1P29056 MDN1YLR106C 14733 nt3.54□□□□□ -1.84
BRF1P29056 ITT1YML068W 1395 nt3.53□□□□□ -1.84
BRF1P29056 TAN1YGL232W 870 nt3.53□□□□□ -1.84
BRF1P29056 YGR190CYGR190C 366 nt3.53□□□□□ -1.84
BRF1P29056 YML094C-AYML094C-A 402 nt3.53□□□□□ -1.84
BRF1P29056 YBL065WYBL065W 345 nt3.53□□□□□ -1.84
BRF1P29056 YBR013CYBR013C 390 nt3.53□□□□□ -1.84
BRF1P29056 RPS10AYOR293W 318 nt3.53□□□□□ -1.84
BRF1P29056 HFD1YMR110C 1599 nt3.53□□□□□ -1.84
BRF1P29056 MSD1YPL104W 1977 nt3.52□□□□□ -1.85
BRF1P29056 GIS4YML006C 2325 nt3.52□□□□□ -1.85
BRF1P29056 RPA14YDR156W 414 nt3.52□□□□□ -1.85
BRF1P29056 GCD14YJL125C 1152 nt3.52□□□□□ -1.85
BRF1P29056 YKR011CYKR011C 1062 nt3.52□□□□□ -1.85
BRF1P29056 RCY1YJL204C 2523 nt3.51□□□□□ -1.85
BRF1P29056 RRN6YBL014C 2685 nt3.51□□□□□ -1.85
BRF1P29056 TIF4631YGR162W 2859 nt3.51□□□□□ -1.85
BRF1P29056 RDS2YPL133C 1341 nt3.51□□□□□ -1.85
BRF1P29056 RMT2YDR465C 1239 nt3.51□□□□□ -1.85
BRF1P29056 GPP2YER062C 753 nt3.51□□□□□ -1.85
BRF1P29056 SPT15YER148W 723 nt3.51□□□□□ -1.85
BRF1P29056 FMP32YFL046W 624 nt3.51□□□□□ -1.85
BRF1P29056 YGL138CYGL138C 1038 nt3.51□□□□□ -1.85
BRF1P29056 YGL177WYGL177W 348 nt3.51□□□□□ -1.85
BRF1P29056 MTC3YGL226W 372 nt3.51□□□□□ -1.85
BRF1P29056 CFD1YIL003W 882 nt3.51□□□□□ -1.85
BRF1P29056 RSM26YJR101W 801 nt3.51□□□□□ -1.85
BRF1P29056 GLO1YML004C 981 nt3.51□□□□□ -1.85
BRF1P29056 SHH3YMR118C 591 nt3.51□□□□□ -1.85
BRF1P29056 FYV6YNL133C 522 nt3.51□□□□□ -1.85
BRF1P29056 CCL1YPR025C 1182 nt3.51□□□□□ -1.85
BRF1P29056 TAF2YCR042C 4224 nt3.51□□□□□ -1.85
BRF1P29056 ECM18YDR125C 1362 nt3.51□□□□□ -1.85
BRF1P29056 VAS1YGR094W 3315 nt3.5□□□□□ -1.85
BRF1P29056 XRN1YGL173C 4587 nt3.5□□□□□ -1.85
BRF1P29056 SST2YLR452C 2097 nt3.5□□□□□ -1.85
BRF1P29056 TOM70YNL121C 1854 nt3.5□□□□□ -1.85
BRF1P29056 DOG1YHR044C 741 nt3.5□□□□□ -1.85
BRF1P29056 HTD2YHR067W 843 nt3.5□□□□□ -1.85
BRF1P29056 YIL024CYIL024C 570 nt3.5□□□□□ -1.85
BRF1P29056 AIM23YJL131C 1071 nt3.5□□□□□ -1.85
BRF1P29056 VPS25YJR102C 609 nt3.5□□□□□ -1.85
BRF1P29056 YLR290CYLR290C 834 nt3.5□□□□□ -1.85
BRF1P29056 RPL19BYBL027W 570 nt3.5□□□□□ -1.85
BRF1P29056 IRC13YOR235W 315 nt3.5□□□□□ -1.85
BRF1P29056 HUT1YPL244C 1020 nt3.5□□□□□ -1.85
BRF1P29056 SSM4YIL030C 3960 nt3.5□□□□□ -1.85
BRF1P29056 RRP5YMR229C 5190 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 537.5 ms