Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM56-RWDD3S4R434 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 AL121603.2-201ENST00000557373 2117 ntBASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.53■□□□□ 0.4
TMEM56-RWDD3S4R434 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.52■□□□□ 0.4
TMEM56-RWDD3S4R434 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM56-RWDD3S4R434 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM56-RWDD3S4R434 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TMEM56-RWDD3S4R434 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.52■□□□□ 0.39
TMEM56-RWDD3S4R434 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 OR7E47P-201ENST00000546390 1422 ntBASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 AL031848.2-201ENST00000607670 837 ntBASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TMEM56-RWDD3S4R434 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
TMEM56-RWDD3S4R434 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 BX664725.1-201ENST00000438252 379 ntBASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TMEM56-RWDD3S4R434 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 AC092667.1-201ENST00000434301 2586 ntBASIC17.48■□□□□ 0.39
TMEM56-RWDD3S4R434 KRT8P33-201ENST00000508125 1423 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms