Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC33.03■■■□□ 2.88
COL17A1Q9UMD9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
COL17A1Q9UMD9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC33.01■■■□□ 2.88
COL17A1Q9UMD9 AC069236.1-201ENST00000604339 616 ntBASIC33.01■■■□□ 2.88
COL17A1Q9UMD9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
COL17A1Q9UMD9 DUSP8P5-201ENST00000422884 1815 ntBASIC33.01■■■□□ 2.87
COL17A1Q9UMD9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
COL17A1Q9UMD9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC33■■■□□ 2.87
COL17A1Q9UMD9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC33■■■□□ 2.87
COL17A1Q9UMD9 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC33■■■□□ 2.87
COL17A1Q9UMD9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
COL17A1Q9UMD9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
COL17A1Q9UMD9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
COL17A1Q9UMD9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 RPPH1-201ENST00000516869 333 ntBASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 BX088651.1-201ENST00000540551 451 ntBASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
COL17A1Q9UMD9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
COL17A1Q9UMD9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 ISCU-212ENST00000547005 795 ntTSL 3 BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
COL17A1Q9UMD9 AC010980.2-201ENST00000587099 1412 ntBASIC32.95■■■□□ 2.86
COL17A1Q9UMD9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 OR2A1-AS1-201ENST00000462305 773 ntBASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 AC008694.1-202ENST00000636953 945 ntBASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC32.94■■■□□ 2.86
COL17A1Q9UMD9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 AL445228.2-201ENST00000605589 952 ntBASIC32.93■■■□□ 2.86
COL17A1Q9UMD9 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms