Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CHCHD3Q9NX63 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CHCHD3Q9NX63 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.82■□□□□ 0.76
CHCHD3Q9NX63 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 MIR4449-201ENST00000578365 66 ntBASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.81■□□□□ 0.76
CHCHD3Q9NX63 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHCHD3Q9NX63 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 AC022616.5-201ENST00000518796 181 ntBASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHCHD3Q9NX63 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 DUX4L9-201ENST00000449051 1259 ntBASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 AC087742.1-201ENST00000575880 1738 ntBASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CHCHD3Q9NX63 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.77■□□□□ 0.76
CHCHD3Q9NX63 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms