Protein–RNA interactions for Protein: Q6Q5H1

TY1A-PR3, Transposon Ty1-PR3 Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR3Q6Q5H1 ATP14YLR295C 375 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 RPS1AYLR441C 768 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 HOR7YMR251W-A 180 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 SOL1YNR034W 966 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 SUS1YBR111W-A 291 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 YHR182WYHR182W 2358 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 YRB30YGL164C 1323 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 VPS33YLR396C 2076 nt4.87□□□□□ -1.63
TY1A-PR3Q6Q5H1 MTL1YGR023W 1656 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 SAP155YFR040W 3009 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 PRP11YDL043C 801 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 YER087C-AYER087C-A 552 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 YER175W-AYER175W-A 165 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 YOL159CYOL159C 516 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 DCS2YOR173W 1062 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 RPS10AYOR293W 318 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 CAM1YPL048W 1248 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 snR17asnR17a 333 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 YPR197CYPR197C 564 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 snR32snR32 188 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 ANR2YKL047W 1551 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 15S_rRNA15S_rRNA 1649 nt4.86□□□□□ -1.63
TY1A-PR3Q6Q5H1 GLO2YDR272W 825 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 NCB2YDR397C 441 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 SEC20YDR498C 1152 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 YER079WYER079W 633 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 YFR052C-AYFR052C-A 306 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 RPN12YFR052W 825 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 YHR125WYHR125W 306 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 AGE2YIL044C 897 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 RPL40BYKR094C 387 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 ECM19YLR390W 339 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 GPI15YNL038W 690 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 ENV9YOR246C 993 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 YPR114WYPR114W 948 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 MRPS9YBR146W 837 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 SLY41YOR307C 1362 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 ATG4YNL223W 1485 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 DBP3YGL078C 1572 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 BIT2YBR270C 1638 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 MSM1YGR171C 1728 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 HIS4YCL030C 2400 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 ACC1YNR016C 6702 nt4.85□□□□□ -1.63
TY1A-PR3Q6Q5H1 MCX1YBR227C 1563 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 BIO3YNR058W 1443 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 SUR2YDR297W 1050 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YHL049CYHL049C 816 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YHR138CYHR138C 345 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YIL060WYIL060W 435 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 RSM25YIL093C 795 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 POR2YIL114C 846 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YKL065W-AYKL065W-A 222 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YAL068W-AYAL068W-A 255 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 SEN34YAR008W 828 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YBL010CYBL010C 843 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YML012C-AYML012C-A 378 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YMR122CYMR122C 375 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 snR10snR10 245 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 YOR034C-AYOR034C-A 243 nt4.84□□□□□ -1.63
TY1A-PR3Q6Q5H1 RNT1YMR239C 1416 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 YJL049WYJL049W 1353 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 CHZ1YER030W 462 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 AML1YGR001C 747 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 PHB1YGR132C 864 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 YHL048C-AYHL048C-A 135 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 YHR182C-AYHR182C-A 474 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 YIL175WYIL175W 318 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 REE1YJL217W 597 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 SDO1YLR022C 753 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 HLJ1YMR161W 675 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 MRPL10YNL284C 969 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 TMC1YOR052C 453 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 RPL19AYBR084C-A 570 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 SGF29YCL010C 780 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 UBP10YNL186W 2379 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 SSZ1YHR064C 1617 nt4.83□□□□□ -1.64
TY1A-PR3Q6Q5H1 SDS23YGL056C 1584 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 YNL284C-AYNL284C-A 1323 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 FAD1YDL045C 921 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 RRP45YDR280W 918 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 SPT2YER161C 1002 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 GET1YGL020C 708 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 SOD2YHR008C 702 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 YIL024CYIL024C 570 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 YOL046CYOL046C 675 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 MCM16YPR046W 546 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 BUD14YAR014C 2130 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 IMD3YLR432W 1572 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 YBP2YGL060W 1926 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 TPD3YAL016W 1908 nt4.82□□□□□ -1.64
TY1A-PR3Q6Q5H1 ADE6YGR061C 4077 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 YDL218WYDL218W 954 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 YEL068CYEL068C 333 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 YER046W-AYER046W-A 330 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 THI5YFL058W 1023 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 YLR126CYLR126C 756 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 RAD33YML011C 534 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 YMR158W-BYMR158W-B 321 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 ASI2YNL159C 870 nt4.81□□□□□ -1.64
TY1A-PR3Q6Q5H1 ARP5YNL059C 2268 nt4.81□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 24.3 ms