Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.05■□□□□ 0.96
ITM2AO43736 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.05■□□□□ 0.96
ITM2AO43736 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.05■□□□□ 0.96
ITM2AO43736 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.05■□□□□ 0.96
ITM2AO43736 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ITM2AO43736 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ITM2AO43736 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITM2AO43736 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ITM2AO43736 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.04■□□□□ 0.96
ITM2AO43736 KRT125P-201ENST00000546827 989 ntBASIC21.04■□□□□ 0.96
ITM2AO43736 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITM2AO43736 MIR4787-201ENST00000607364 84 ntBASIC21.04■□□□□ 0.96
ITM2AO43736 AC010997.5-201ENST00000609182 354 ntBASIC21.04■□□□□ 0.96
ITM2AO43736 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
ITM2AO43736 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITM2AO43736 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ITM2AO43736 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.04■□□□□ 0.96
ITM2AO43736 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ITM2AO43736 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ITM2AO43736 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ITM2AO43736 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.04■□□□□ 0.96
ITM2AO43736 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.04■□□□□ 0.96
ITM2AO43736 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 AL451085.2-201ENST00000605085 799 ntBASIC21.03■□□□□ 0.96
ITM2AO43736 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.03■□□□□ 0.96
ITM2AO43736 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.03■□□□□ 0.96
ITM2AO43736 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ITM2AO43736 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.03■□□□□ 0.96
ITM2AO43736 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ITM2AO43736 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ITM2AO43736 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
ITM2AO43736 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITM2AO43736 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ITM2AO43736 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
ITM2AO43736 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.02■□□□□ 0.96
ITM2AO43736 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
ITM2AO43736 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ITM2AO43736 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
ITM2AO43736 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
ITM2AO43736 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.01■□□□□ 0.95
ITM2AO43736 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.01■□□□□ 0.95
ITM2AO43736 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 Z92544.1-202ENST00000571933 1220 ntBASIC21.01■□□□□ 0.95
ITM2AO43736 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.01■□□□□ 0.95
ITM2AO43736 OR7E47P-201ENST00000546390 1422 ntBASIC21.01■□□□□ 0.95
ITM2AO43736 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.01■□□□□ 0.95
ITM2AO43736 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ITM2AO43736 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21■□□□□ 0.95
ITM2AO43736 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 LINC01521-201ENST00000504184 1943 ntBASIC21■□□□□ 0.95
ITM2AO43736 AC133637.1-201ENST00000624115 1537 ntBASIC21■□□□□ 0.95
ITM2AO43736 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ITM2AO43736 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21■□□□□ 0.95
ITM2AO43736 AC104564.3-201ENST00000582367 638 ntBASIC21■□□□□ 0.95
ITM2AO43736 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ITM2AO43736 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
ITM2AO43736 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.99■□□□□ 0.95
ITM2AO43736 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.99■□□□□ 0.95
ITM2AO43736 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ITM2AO43736 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms