Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 OR2I1P-207ENST00000453522 948 ntBASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 AC068587.7-201ENST00000641602 218 ntBASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.25■□□□□ 0.83
TRBV5-3A0A0A0MS03 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 AC099791.2-201ENST00000605725 427 ntBASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRBV5-3A0A0A0MS03 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 MIR3181-201ENST00000578512 73 ntBASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRBV5-3A0A0A0MS03 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 AC104564.3-201ENST00000582367 638 ntBASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRBV5-3A0A0A0MS03 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV5-3A0A0A0MS03 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRBV5-3A0A0A0MS03 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRBV5-3A0A0A0MS03 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.19■□□□□ 0.82
TRBV5-3A0A0A0MS03 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms