Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC009237.3-201ENST00000393279 1427 ntBASIC11.35□□□□□ -0.59
KRTAP4-1Q9BYQ7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC105036.2-201ENST00000569468 176 ntBASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
KRTAP4-1Q9BYQ7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC11.33□□□□□ -0.59
KRTAP4-1Q9BYQ7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 SLC29A4P1-201ENST00000398760 971 ntBASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 AF201337.1-201ENST00000520239 748 ntBASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 PFKL-212ENST00000628044 129 ntTSL 3 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC11.33□□□□□ -0.6
KRTAP4-1Q9BYQ7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC010536.3-201ENST00000620306 533 ntBASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 MARS-234ENST00000630571 216 ntTSL 5 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 MARS-235ENST00000630803 183 ntTSL 3 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
KRTAP4-1Q9BYQ7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 PRORSD1P-201ENST00000295112 541 ntBASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC010141.2-201ENST00000452426 721 ntBASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC093827.2-201ENST00000512654 315 ntBASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC133552.2-202ENST00000575694 574 ntBASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
KRTAP4-1Q9BYQ7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms