Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 AC010141.2-201ENST00000452426 721 ntBASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD4Q5XG99 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 KRT18P20-201ENST00000548986 1279 ntBASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD4Q5XG99 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 AC138907.5-202ENST00000569484 235 ntBASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 ABCB10P4-201ENST00000566803 2184 ntBASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LYSMD4Q5XG99 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 DUSP8P5-201ENST00000422884 1815 ntBASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 AC020928.2-201ENST00000588717 2197 ntBASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD4Q5XG99 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 AC098934.4-201ENST00000564127 592 ntBASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD4Q5XG99 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 MIR4758-201ENST00000577688 71 ntBASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 AC013268.1-206ENST00000638368 961 ntBASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 AC112229.1-201ENST00000639295 961 ntBASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
LYSMD4Q5XG99 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LYSMD4Q5XG99 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.33■■□□□ 1
LYSMD4Q5XG99 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.32■■□□□ 1
LYSMD4Q5XG99 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LYSMD4Q5XG99 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.32■■□□□ 1
LYSMD4Q5XG99 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.32■■□□□ 1
LYSMD4Q5XG99 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.32■■□□□ 1
LYSMD4Q5XG99 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.32■■□□□ 1
LYSMD4Q5XG99 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.32■■□□□ 1
LYSMD4Q5XG99 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LYSMD4Q5XG99 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LYSMD4Q5XG99 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LYSMD4Q5XG99 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 260.8 ms