Protein–RNA interactions for Protein: Q99337

TY1B-NL2, Transposon Ty1-NL2 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL2Q99337 RIB3YDR487C 627 nt13.73□□□□□ -0.21
TY1B-NL2Q99337 RTF1YGL244W 1677 nt13.72□□□□□ -0.21
TY1B-NL2Q99337 YEL008WYEL008W 381 nt13.72□□□□□ -0.21
TY1B-NL2Q99337 YHR056W-AYHR056W-A 435 nt13.72□□□□□ -0.21
TY1B-NL2Q99337 PIB2YGL023C 1908 nt13.72□□□□□ -0.21
TY1B-NL2Q99337 GOR1YNL274C 1053 nt13.71□□□□□ -0.21
TY1B-NL2Q99337 MSB4YOL112W 1479 nt13.7□□□□□ -0.22
TY1B-NL2Q99337 PEX2YJL210W 816 nt13.7□□□□□ -0.22
TY1B-NL2Q99337 BOP3YNL042W 1191 nt13.7□□□□□ -0.22
TY1B-NL2Q99337 YPI1YFR003C 468 nt13.68□□□□□ -0.22
TY1B-NL2Q99337 LOT5YKL183W 921 nt13.67□□□□□ -0.22
TY1B-NL2Q99337 SHH4YLR164W 507 nt13.65□□□□□ -0.22
TY1B-NL2Q99337 TOM6YOR045W 186 nt13.65□□□□□ -0.22
TY1B-NL2Q99337 AAC1YMR056C 930 nt13.64□□□□□ -0.23
TY1B-NL2Q99337 YPL222C-AYPL222C-A 246 nt13.61□□□□□ -0.23
TY1B-NL2Q99337 TIR3YIL011W 810 nt13.59□□□□□ -0.23
TY1B-NL2Q99337 HIP1YGR191W 1812 nt13.58□□□□□ -0.24
TY1B-NL2Q99337 YJR114WYJR114W 393 nt13.55□□□□□ -0.24
TY1B-NL2Q99337 RAX1YOR301W 1308 nt13.52□□□□□ -0.25
TY1B-NL2Q99337 DUT1YBR252W 444 nt13.49□□□□□ -0.25
TY1B-NL2Q99337 PAU5YFL020C 369 nt13.46□□□□□ -0.25
TY1B-NL2Q99337 GND1YHR183W 1470 nt13.46□□□□□ -0.26
TY1B-NL2Q99337 AGP1YCL025C 1902 nt13.44□□□□□ -0.26
TY1B-NL2Q99337 ATG15YCR068W 1563 nt13.43□□□□□ -0.26
TY1B-NL2Q99337 MET28YIR017C 564 nt13.43□□□□□ -0.26
TY1B-NL2Q99337 PTK1YKL198C 1989 nt13.43□□□□□ -0.26
TY1B-NL2Q99337 YFL054CYFL054C 1941 nt13.42□□□□□ -0.26
TY1B-NL2Q99337 PGC1YPL206C 966 nt13.42□□□□□ -0.26
TY1B-NL2Q99337 TIF6YPR016C 738 nt13.42□□□□□ -0.26
TY1B-NL2Q99337 APT2YDR441C 546 nt13.41□□□□□ -0.26
TY1B-NL2Q99337 NBP35YGL091C 987 nt13.39□□□□□ -0.27
TY1B-NL2Q99337 YJL064WYJL064W 396 nt13.39□□□□□ -0.27
TY1B-NL2Q99337 POM34YLR018C 900 nt13.38□□□□□ -0.27
TY1B-NL2Q99337 YML089CYML089C 369 nt13.38□□□□□ -0.27
TY1B-NL2Q99337 LSB3YFR024C-A 1380 nt13.37□□□□□ -0.27
TY1B-NL2Q99337 AQY2YLL052C 450 nt13.37□□□□□ -0.27
TY1B-NL2Q99337 SLG1YOR008C 1137 nt13.37□□□□□ -0.27
TY1B-NL2Q99337 FIT3YOR383C 615 nt13.37□□□□□ -0.27
TY1B-NL2Q99337 TIM44YIL022W 1296 nt13.36□□□□□ -0.27
TY1B-NL2Q99337 PAU19YMR325W 375 nt13.36□□□□□ -0.27
TY1B-NL2Q99337 RIB2YOL066C 1776 nt13.35□□□□□ -0.27
TY1B-NL2Q99337 YBR232CYBR232C 360 nt13.34□□□□□ -0.27
TY1B-NL2Q99337 CCA1YER168C 1641 nt13.32□□□□□ -0.28
TY1B-NL2Q99337 PRO1YDR300C 1287 nt13.3□□□□□ -0.28
TY1B-NL2Q99337 ZTA1YBR046C 1005 nt13.28□□□□□ -0.28
TY1B-NL2Q99337 TIP1YBR067C 633 nt13.27□□□□□ -0.29
TY1B-NL2Q99337 SWE1YJL187C 2460 nt13.26□□□□□ -0.29
TY1B-NL2Q99337 AKR2YOR034C 2250 nt13.25□□□□□ -0.29
TY1B-NL2Q99337 SMM1YNR015W 1155 nt13.25□□□□□ -0.29
TY1B-NL2Q99337 LSC2YGR244C 1284 nt13.23□□□□□ -0.29
TY1B-NL2Q99337 ERG6YML008C 1152 nt13.23□□□□□ -0.29
TY1B-NL2Q99337 DUS1YML080W 1272 nt13.22□□□□□ -0.29
TY1B-NL2Q99337 ALD4YOR374W 1560 nt13.21□□□□□ -0.3
TY1B-NL2Q99337 RIB1YBL033C 1038 nt13.18□□□□□ -0.3
TY1B-NL2Q99337 STP3YLR375W 1032 nt13.15□□□□□ -0.3
TY1B-NL2Q99337 PRY1YJL079C 900 nt13.13□□□□□ -0.31
TY1B-NL2Q99337 YJL055WYJL055W 738 nt13.12□□□□□ -0.31
TY1B-NL2Q99337 THI72YOR192C 1800 nt13.09□□□□□ -0.31
TY1B-NL2Q99337 SOD2YHR008C 702 nt13.08□□□□□ -0.32
TY1B-NL2Q99337 RDN18-1RDN18-1 1800 nt13.08□□□□□ -0.32
TY1B-NL2Q99337 RDN18-2RDN18-2 1800 nt13.08□□□□□ -0.32
TY1B-NL2Q99337 VRG4YGL225W 1014 nt13.08□□□□□ -0.32
TY1B-NL2Q99337 YAR028WYAR028W 705 nt13.07□□□□□ -0.32
TY1B-NL2Q99337 QDR2YIL121W 1629 nt13.05□□□□□ -0.32
TY1B-NL2Q99337 HXT12YIL170W 1374 nt13.05□□□□□ -0.32
TY1B-NL2Q99337 POP2YNR052C 1302 nt13.03□□□□□ -0.32
TY1B-NL2Q99337 FCY21YER060W 1587 nt13.01□□□□□ -0.33
TY1B-NL2Q99337 CCT5YJR064W 1689 nt13.01□□□□□ -0.33
TY1B-NL2Q99337 GAP1YKR039W 1809 nt13.01□□□□□ -0.33
TY1B-NL2Q99337 UGA4YDL210W 1716 nt13□□□□□ -0.33
TY1B-NL2Q99337 YIA6YIL006W 1122 nt13□□□□□ -0.33
TY1B-NL2Q99337 DIF1YLR437C 402 nt12.99□□□□□ -0.33
TY1B-NL2Q99337 ALP1YNL270C 1722 nt12.99□□□□□ -0.33
TY1B-NL2Q99337 STR3YGL184C 1398 nt12.98□□□□□ -0.33
TY1B-NL2Q99337 BMT6YLR063W 1098 nt12.98□□□□□ -0.33
TY1B-NL2Q99337 TAF13YML098W 504 nt12.95□□□□□ -0.34
TY1B-NL2Q99337 HSP60YLR259C 1719 nt12.94□□□□□ -0.34
TY1B-NL2Q99337 ARP6YLR085C 1317 nt12.94□□□□□ -0.34
TY1B-NL2Q99337 YCL074WYCL074W 927 nt12.93□□□□□ -0.34
TY1B-NL2Q99337 YER152W-AYER152W-A 567 nt12.89□□□□□ -0.35
TY1B-NL2Q99337 PAR32YDL173W 888 nt12.88□□□□□ -0.35
TY1B-NL2Q99337 MTG2YHR168W 1557 nt12.88□□□□□ -0.35
TY1B-NL2Q99337 RTN2YDL204W 1182 nt12.87□□□□□ -0.35
TY1B-NL2Q99337 YMR262WYMR262W 942 nt12.82□□□□□ -0.36
TY1B-NL2Q99337 YJL118WYJL118W 660 nt12.82□□□□□ -0.36
TY1B-NL2Q99337 PLB1YMR008C 1995 nt12.8□□□□□ -0.36
TY1B-NL2Q99337 LSB5YCL034W 1065 nt12.78□□□□□ -0.36
TY1B-NL2Q99337 YCP4YCR004C 744 nt12.76□□□□□ -0.37
TY1B-NL2Q99337 SED1YDR077W 1017 nt12.76□□□□□ -0.37
TY1B-NL2Q99337 GSF2YML048W 1212 nt12.76□□□□□ -0.37
TY1B-NL2Q99337 MEP3YPR138C 1470 nt12.76□□□□□ -0.37
TY1B-NL2Q99337 TUB4YLR212C 1422 nt12.73□□□□□ -0.37
TY1B-NL2Q99337 UTR1YJR049C 1593 nt12.73□□□□□ -0.37
TY1B-NL2Q99337 FUR4YBR021W 1902 nt12.71□□□□□ -0.37
TY1B-NL2Q99337 BUD20YLR074C 501 nt12.68□□□□□ -0.38
TY1B-NL2Q99337 SNZ1YMR096W 894 nt12.68□□□□□ -0.38
TY1B-NL2Q99337 KRE1YNL322C 942 nt12.68□□□□□ -0.38
TY1B-NL2Q99337 GAL3YDR009W 1563 nt12.67□□□□□ -0.38
TY1B-NL2Q99337 NUC1YJL208C 990 nt12.67□□□□□ -0.38
TY1B-NL2Q99337 APS2YJR058C 444 nt12.67□□□□□ -0.38
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms