Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 NAT4YMR069W 858 nt9.09□□□□□ -0.95
YLR040CQ07988 UTR1YJR049C 1593 nt9.08□□□□□ -0.96
YLR040CQ07988 GAP1YKR039W 1809 nt9.08□□□□□ -0.96
YLR040CQ07988 SBA1YKL117W 651 nt9.06□□□□□ -0.96
YLR040CQ07988 SSN3YPL042C 1668 nt9.05□□□□□ -0.96
YLR040CQ07988 SAM35YHR083W 990 nt9.05□□□□□ -0.96
YLR040CQ07988 SHH4YLR164W 507 nt9.05□□□□□ -0.96
YLR040CQ07988 NDI1YML120C 1542 nt9.05□□□□□ -0.96
YLR040CQ07988 PRO1YDR300C 1287 nt9.04□□□□□ -0.96
YLR040CQ07988 POM34YLR018C 900 nt9.01□□□□□ -0.97
YLR040CQ07988 ATG15YCR068W 1563 nt8.99□□□□□ -0.97
YLR040CQ07988 CSM2YIL132C 642 nt8.99□□□□□ -0.97
YLR040CQ07988 YML089CYML089C 369 nt8.99□□□□□ -0.97
YLR040CQ07988 YDR010CYDR010C 333 nt8.98□□□□□ -0.97
YLR040CQ07988 SHB17YKR043C 816 nt8.98□□□□□ -0.97
YLR040CQ07988 INA1YLR413W 2028 nt8.98□□□□□ -0.97
YLR040CQ07988 YHL019W-AYHL019W-A 594 nt8.96□□□□□ -0.98
YLR040CQ07988 SPT20YOL148C 1815 nt8.96□□□□□ -0.98
YLR040CQ07988 ZRT3YKL175W 1512 nt8.95□□□□□ -0.98
YLR040CQ07988 SFA1YDL168W 1161 nt8.94□□□□□ -0.98
YLR040CQ07988 MSF1YPR047W 1410 nt8.94□□□□□ -0.98
YLR040CQ07988 TOM6YOR045W 186 nt8.93□□□□□ -0.98
YLR040CQ07988 RET2YFR051C 1641 nt8.93□□□□□ -0.98
YLR040CQ07988 RPC82YPR190C 1965 nt8.92□□□□□ -0.98
YLR040CQ07988 THI74YDR438W 1113 nt8.92□□□□□ -0.98
YLR040CQ07988 DIF1YLR437C 402 nt8.91□□□□□ -0.98
YLR040CQ07988 MIR1YJR077C 936 nt8.9□□□□□ -0.98
YLR040CQ07988 BSP1YPR171W 1731 nt8.89□□□□□ -0.99
YLR040CQ07988 UBA4YHR111W 1323 nt8.88□□□□□ -0.99
YLR040CQ07988 PHO89YBR296C 1725 nt8.88□□□□□ -0.99
YLR040CQ07988 HXT1YHR094C 1713 nt8.87□□□□□ -0.99
YLR040CQ07988 DBP1YPL119C 1854 nt8.86□□□□□ -0.99
YLR040CQ07988 PEX2YJL210W 816 nt8.84□□□□□ -0.99
YLR040CQ07988 TIF6YPR016C 738 nt8.84□□□□□ -0.99
YLR040CQ07988 YJL067WYJL067W 351 nt8.83□□□□□ -1
YLR040CQ07988 YSR3YKR053C 1215 nt8.82□□□□□ -1
YLR040CQ07988 HIP1YGR191W 1812 nt8.82□□□□□ -1
YLR040CQ07988 HSL7YBR133C 2484 nt8.81□□□□□ -1
YLR040CQ07988 COQ2YNR041C 1119 nt8.8□□□□□ -1
YLR040CQ07988 YCR087WYCR087W 516 nt8.79□□□□□ -1
YLR040CQ07988 MRP20YDR405W 792 nt8.79□□□□□ -1
YLR040CQ07988 SHY1YGR112W 1170 nt8.79□□□□□ -1
YLR040CQ07988 YAR028WYAR028W 705 nt8.79□□□□□ -1
YLR040CQ07988 RDN25-1RDN25-1 3396 nt8.78□□□□□ -1
YLR040CQ07988 RDN25-2RDN25-2 3396 nt8.78□□□□□ -1
YLR040CQ07988 MET28YIR017C 564 nt8.78□□□□□ -1
YLR040CQ07988 LIP1YMR298W 453 nt8.77□□□□□ -1.01
YLR040CQ07988 GLR1YPL091W 1452 nt8.77□□□□□ -1.01
YLR040CQ07988 GID7YCL039W 2238 nt8.76□□□□□ -1.01
YLR040CQ07988 SED1YDR077W 1017 nt8.76□□□□□ -1.01
YLR040CQ07988 YBL086CYBL086C 1401 nt8.75□□□□□ -1.01
YLR040CQ07988 YER190C-AYER190C-A 576 nt8.74□□□□□ -1.01
YLR040CQ07988 YGR296C-AYGR296C-A 576 nt8.74□□□□□ -1.01
YLR040CQ07988 YML133W-AYML133W-A 576 nt8.74□□□□□ -1.01
YLR040CQ07988 YMR244WYMR244W 1068 nt8.74□□□□□ -1.01
YLR040CQ07988 YNL339W-AYNL339W-A 576 nt8.74□□□□□ -1.01
YLR040CQ07988 YPL283W-AYPL283W-A 576 nt8.74□□□□□ -1.01
YLR040CQ07988 YGL034CYGL034C 366 nt8.73□□□□□ -1.01
YLR040CQ07988 NRT1YOR071C 1797 nt8.73□□□□□ -1.01
YLR040CQ07988 CLB6YGR109C 1143 nt8.72□□□□□ -1.01
YLR040CQ07988 UTH1YKR042W 1098 nt8.72□□□□□ -1.01
YLR040CQ07988 XYL2YLR070C 1071 nt8.72□□□□□ -1.01
YLR040CQ07988 MTG2YHR168W 1557 nt8.72□□□□□ -1.01
YLR040CQ07988 RPL4BYDR012W 1089 nt8.71□□□□□ -1.02
YLR040CQ07988 RPL4AYBR031W 1089 nt8.71□□□□□ -1.02
YLR040CQ07988 PAU21YOR394W 495 nt8.71□□□□□ -1.02
YLR040CQ07988 PAU22YPL282C 495 nt8.71□□□□□ -1.02
YLR040CQ07988 SAM1YLR180W 1149 nt8.7□□□□□ -1.02
YLR040CQ07988 URA6YKL024C 615 nt8.69□□□□□ -1.02
YLR040CQ07988 AKR2YOR034C 2250 nt8.68□□□□□ -1.02
YLR040CQ07988 FIT3YOR383C 615 nt8.68□□□□□ -1.02
YLR040CQ07988 ALP1YNL270C 1722 nt8.68□□□□□ -1.02
YLR040CQ07988 LEU9YOR108W 1815 nt8.67□□□□□ -1.02
YLR040CQ07988 AIM45YPR004C 1035 nt8.67□□□□□ -1.02
YLR040CQ07988 ILV3YJR016C 1758 nt8.66□□□□□ -1.02
YLR040CQ07988 MUP1YGR055W 1725 nt8.66□□□□□ -1.02
YLR040CQ07988 CWC15YDR163W 528 nt8.65□□□□□ -1.02
YLR040CQ07988 TOA2YKL058W 369 nt8.65□□□□□ -1.02
YLR040CQ07988 ZTA1YBR046C 1005 nt8.65□□□□□ -1.02
YLR040CQ07988 BRR1YPR057W 1026 nt8.65□□□□□ -1.02
YLR040CQ07988 UFO1YML088W 2007 nt8.64□□□□□ -1.03
YLR040CQ07988 YIL100C-AYIL100C-A 339 nt8.64□□□□□ -1.03
YLR040CQ07988 RPS14BYJL191W 417 nt8.64□□□□□ -1.03
YLR040CQ07988 YNL024CYNL024C 741 nt8.64□□□□□ -1.03
YLR040CQ07988 HOL1YNR055C 1761 nt8.63□□□□□ -1.03
YLR040CQ07988 ARO7YPR060C 771 nt8.63□□□□□ -1.03
YLR040CQ07988 ESBP6YNL125C 2022 nt8.63□□□□□ -1.03
YLR040CQ07988 RIM8YGL045W 1629 nt8.62□□□□□ -1.03
YLR040CQ07988 RBG2YGR173W 1107 nt8.62□□□□□ -1.03
YLR040CQ07988 YOR325WYOR325W 474 nt8.62□□□□□ -1.03
YLR040CQ07988 YPL251WYPL251W 303 nt8.62□□□□□ -1.03
YLR040CQ07988 RBG1YAL036C 1110 nt8.61□□□□□ -1.03
YLR040CQ07988 YMR226CYMR226C 804 nt8.61□□□□□ -1.03
YLR040CQ07988 PET8YNL003C 855 nt8.61□□□□□ -1.03
YLR040CQ07988 OYE3YPL171C 1203 nt8.61□□□□□ -1.03
YLR040CQ07988 GND2YGR256W 1479 nt8.59□□□□□ -1.03
YLR040CQ07988 TRT2tT(CGU)K 72 nt8.58□□□□□ -1.04
YLR040CQ07988 YGL114WYGL114W 2178 nt8.58□□□□□ -1.04
YLR040CQ07988 OPI10YOL032W 741 nt8.56□□□□□ -1.04
YLR040CQ07988 MEP3YPR138C 1470 nt8.56□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms