Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YHL019W-AYHL019W-A 594 nt10.49□□□□□ -0.73
PUF3Q07807 PRO1YDR300C 1287 nt10.48□□□□□ -0.73
PUF3Q07807 SFA1YDL168W 1161 nt10.47□□□□□ -0.73
PUF3Q07807 POM34YLR018C 900 nt10.46□□□□□ -0.73
PUF3Q07807 MCH5YOR306C 1566 nt10.46□□□□□ -0.74
PUF3Q07807 GAP1YKR039W 1809 nt10.46□□□□□ -0.74
PUF3Q07807 CSM2YIL132C 642 nt10.45□□□□□ -0.74
PUF3Q07807 ATG15YCR068W 1563 nt10.43□□□□□ -0.74
PUF3Q07807 YML089CYML089C 369 nt10.43□□□□□ -0.74
PUF3Q07807 YCR087WYCR087W 516 nt10.42□□□□□ -0.74
PUF3Q07807 TOM6YOR045W 186 nt10.42□□□□□ -0.74 RIP-Chip
PUF3Q07807 MRP20YDR405W 792 nt10.41□□□□□ -0.74 RIP-Chip
PUF3Q07807 YFL015W-AYFL015W-A 318 nt10.4□□□□□ -0.74
PUF3Q07807 XYL2YLR070C 1071 nt10.4□□□□□ -0.74
PUF3Q07807 NAR1YNL240C 1476 nt10.4□□□□□ -0.74
PUF3Q07807 UTR1YJR049C 1593 nt10.39□□□□□ -0.75
PUF3Q07807 YGL034CYGL034C 366 nt10.39□□□□□ -0.75
PUF3Q07807 PRM5YIL117C 957 nt10.38□□□□□ -0.75
PUF3Q07807 COQ2YNR041C 1119 nt10.37□□□□□ -0.75 RIP-Chip
PUF3Q07807 SAM35YHR083W 990 nt10.36□□□□□ -0.75
PUF3Q07807 PEX2YJL210W 816 nt10.34□□□□□ -0.75
PUF3Q07807 ALD4YOR374W 1560 nt10.34□□□□□ -0.75
PUF3Q07807 AIM45YPR004C 1035 nt10.31□□□□□ -0.76 RIP-Chip
PUF3Q07807 PBP1YGR178C 2169 nt10.31□□□□□ -0.76
PUF3Q07807 CYT2YKL087C 675 nt10.3□□□□□ -0.76 RIP-Chip
PUF3Q07807 CLB6YGR109C 1143 nt10.29□□□□□ -0.76
PUF3Q07807 HIF1YLL022C 1158 nt10.29□□□□□ -0.76
PUF3Q07807 TIF6YPR016C 738 nt10.29□□□□□ -0.76
PUF3Q07807 HIP1YGR191W 1812 nt10.28□□□□□ -0.76
PUF3Q07807 RPL4BYDR012W 1089 nt10.27□□□□□ -0.77
PUF3Q07807 RBG1YAL036C 1110 nt10.27□□□□□ -0.77
PUF3Q07807 RPL4AYBR031W 1089 nt10.27□□□□□ -0.77
PUF3Q07807 DIF1YLR437C 402 nt10.26□□□□□ -0.77
PUF3Q07807 MET28YIR017C 564 nt10.25□□□□□ -0.77
PUF3Q07807 UTH1YKR042W 1098 nt10.25□□□□□ -0.77
PUF3Q07807 NRT1YOR071C 1797 nt10.24□□□□□ -0.77
PUF3Q07807 PAU21YOR394W 495 nt10.21□□□□□ -0.77
PUF3Q07807 PAU22YPL282C 495 nt10.21□□□□□ -0.77
PUF3Q07807 NDI1YML120C 1542 nt10.21□□□□□ -0.78
PUF3Q07807 RPS14BYJL191W 417 nt10.18□□□□□ -0.78
PUF3Q07807 YAR028WYAR028W 705 nt10.18□□□□□ -0.78
PUF3Q07807 FIT3YOR383C 615 nt10.14□□□□□ -0.79
PUF3Q07807 HXT1YHR094C 1713 nt10.13□□□□□ -0.79
PUF3Q07807 ARO7YPR060C 771 nt10.12□□□□□ -0.79
PUF3Q07807 ZRT3YKL175W 1512 nt10.11□□□□□ -0.79
PUF3Q07807 DBP1YPL119C 1854 nt10.1□□□□□ -0.79
PUF3Q07807 LIP1YMR298W 453 nt10.1□□□□□ -0.79
PUF3Q07807 MTG2YHR168W 1557 nt10.09□□□□□ -0.79
PUF3Q07807 AKR2YOR034C 2250 nt10.09□□□□□ -0.79
PUF3Q07807 SED1YDR077W 1017 nt10.09□□□□□ -0.79
PUF3Q07807 SDH5YOL071W 489 nt10.09□□□□□ -0.79 RIP-Chip
PUF3Q07807 ALP1YNL270C 1722 nt10.09□□□□□ -0.79
PUF3Q07807 YER190C-AYER190C-A 576 nt10.08□□□□□ -0.8
PUF3Q07807 YGR296C-AYGR296C-A 576 nt10.08□□□□□ -0.8
PUF3Q07807 YML133W-AYML133W-A 576 nt10.08□□□□□ -0.8
PUF3Q07807 YNL339W-AYNL339W-A 576 nt10.08□□□□□ -0.8
PUF3Q07807 YPL283W-AYPL283W-A 576 nt10.08□□□□□ -0.8
PUF3Q07807 TSC10YBR265W 963 nt10.07□□□□□ -0.8
PUF3Q07807 ZTA1YBR046C 1005 nt10.05□□□□□ -0.8
PUF3Q07807 YAT1YAR035W 2064 nt10.04□□□□□ -0.8
PUF3Q07807 GLR1YPL091W 1452 nt10.03□□□□□ -0.8
PUF3Q07807 YBL086CYBL086C 1401 nt10.01□□□□□ -0.81
PUF3Q07807 SHY1YGR112W 1170 nt10.01□□□□□ -0.81 RIP-Chip
PUF3Q07807 SAM1YLR180W 1149 nt10.01□□□□□ -0.81
PUF3Q07807 INA1YLR413W 2028 nt9.99□□□□□ -0.81
PUF3Q07807 YGR012WYGR012W 1182 nt9.99□□□□□ -0.81
PUF3Q07807 YLR279WYLR279W 390 nt9.98□□□□□ -0.81
PUF3Q07807 TOA2YKL058W 369 nt9.97□□□□□ -0.81
PUF3Q07807 SBA1YKL117W 651 nt9.96□□□□□ -0.82
PUF3Q07807 BRR1YPR057W 1026 nt9.96□□□□□ -0.82
PUF3Q07807 YJL067WYJL067W 351 nt9.95□□□□□ -0.82 RIP-Chip
PUF3Q07807 YLR111WYLR111W 333 nt9.95□□□□□ -0.82
PUF3Q07807 CMP2YML057W 1815 nt9.95□□□□□ -0.82
PUF3Q07807 LEU9YOR108W 1815 nt9.94□□□□□ -0.82
PUF3Q07807 RAD23YEL037C 1197 nt9.93□□□□□ -0.82
PUF3Q07807 YPL251WYPL251W 303 nt9.93□□□□□ -0.82 RIP-Chip
PUF3Q07807 MSB4YOL112W 1479 nt9.92□□□□□ -0.82
PUF3Q07807 URA6YKL024C 615 nt9.91□□□□□ -0.82
PUF3Q07807 YMR244WYMR244W 1068 nt9.89□□□□□ -0.83
PUF3Q07807 YPL222C-AYPL222C-A 246 nt9.89□□□□□ -0.83
PUF3Q07807 GND2YGR256W 1479 nt9.89□□□□□ -0.83
PUF3Q07807 MEP3YPR138C 1470 nt9.89□□□□□ -0.83
PUF3Q07807 PAM17YKR065C 594 nt9.88□□□□□ -0.83
PUF3Q07807 YMR103CYMR103C 363 nt9.88□□□□□ -0.83
PUF3Q07807 RPC82YPR190C 1965 nt9.88□□□□□ -0.83
PUF3Q07807 SPT20YOL148C 1815 nt9.87□□□□□ -0.83
PUF3Q07807 YMR226CYMR226C 804 nt9.87□□□□□ -0.83
PUF3Q07807 UFO1YML088W 2007 nt9.87□□□□□ -0.83
PUF3Q07807 OYE3YPL171C 1203 nt9.86□□□□□ -0.83
PUF3Q07807 TRT2tT(CGU)K 72 nt9.85□□□□□ -0.83
PUF3Q07807 PET8YNL003C 855 nt9.85□□□□□ -0.83
PUF3Q07807 SAM2YDR502C 1155 nt9.84□□□□□ -0.83
PUF3Q07807 UGA4YDL210W 1716 nt9.82□□□□□ -0.84
PUF3Q07807 CWC15YDR163W 528 nt9.82□□□□□ -0.84
PUF3Q07807 RIB3YDR487C 627 nt9.82□□□□□ -0.84
PUF3Q07807 REG2YBR050C 1017 nt9.82□□□□□ -0.84
PUF3Q07807 APT2YDR441C 546 nt9.8□□□□□ -0.84
PUF3Q07807 FCY21YER060W 1587 nt9.79□□□□□ -0.84
PUF3Q07807 GND1YHR183W 1470 nt9.77□□□□□ -0.85
PUF3Q07807 SSN3YPL042C 1668 nt9.77□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 40.1 ms