Protein–RNA interactions for Protein: P62280

RPS11, 40S ribosomal protein S11, humanhuman

Known RBP eCLIP

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11P62280 SYCP2L-202ENST00000341041 3069 ntTSL 210.81□□□□□ -0.681e-323■■□□□ 12.9
RPS11P62280 FASTK-213ENST00000482806 1826 ntTSL 519.8■□□□□ 0.762e-8■■□□□ 12.8
RPS11P62280 FASTK-215ENST00000489884 1751 ntTSL 1 (best)19.05■□□□□ 0.642e-8■■□□□ 12.8
RPS11P62280 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.89■□□□□ 0.612e-8■■□□□ 12.8
RPS11P62280 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.512e-8■■□□□ 12.8
RPS11P62280 FASTK-216ENST00000496663 818 ntTSL 217.96■□□□□ 0.472e-8■■□□□ 12.8
RPS11P62280 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.33■□□□□ 0.372e-8■■□□□ 12.8
RPS11P62280 FASTK-205ENST00000461979 720 ntTSL 517.29■□□□□ 0.362e-8■■□□□ 12.8
RPS11P62280 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.57■□□□□ 0.082e-8■■□□□ 12.8
RPS11P62280 FASTK-204ENST00000460980 1521 ntTSL 513.68□□□□□ -0.222e-8■■□□□ 12.8
RPS11P62280 RN7SL2-201ENST00000490232 300 ntBASIC10.37□□□□□ -0.757e-29■■□□□ 12.7
RPS11P62280 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC7.99□□□□□ -1.137e-29■■□□□ 12.7
RPS11P62280 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC7.31□□□□□ -1.247e-29■■□□□ 12.7
RPS11P62280 TAGLN2-204ENST00000397334 801 ntTSL 516.06■□□□□ 0.163e-6■■□□□ 12.7
RPS11P62280 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.38□□□□□ -0.273e-6■■□□□ 12.7
RPS11P62280 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.513e-6■■□□□ 12.7
RPS11P62280 TAGLN2-205ENST00000478033 1051 ntTSL 210.62□□□□□ -0.713e-6■■□□□ 12.7
RPS11P62280 HADHA-201ENST00000380649 3037 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.833e-6■■□□□ 12.7
RPS11P62280 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC9.78□□□□□ -0.843e-6■■□□□ 12.7
RPS11P62280 HMGN2-204ENST00000464888 565 ntTSL 28.54□□□□□ -1.043e-8■■□□□ 12.7
RPS11P62280 HMGN2-202ENST00000460563 1045 ntTSL 58.37□□□□□ -1.073e-8■■□□□ 12.7
RPS11P62280 HADHA-204ENST00000492433 752 ntTSL 28.23□□□□□ -1.093e-6■■□□□ 12.7
RPS11P62280 HMGN2-203ENST00000463817 853 ntTSL 27.56□□□□□ -1.23e-8■■□□□ 12.7
RPS11P62280 HMGN2-208ENST00000479815 1030 ntTSL 57.56□□□□□ -1.23e-8■■□□□ 12.7
RPS11P62280 HMGN2-206ENST00000467700 932 ntTSL 26.21□□□□□ -1.423e-8■■□□□ 12.7
RPS11P62280 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.53e-8■■□□□ 12.7
RPS11P62280 HMGN2-207ENST00000468388 320 ntTSL 35.71□□□□□ -1.53e-8■■□□□ 12.7
RPS11P62280 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.883e-8■■□□□ 12.7
RPS11P62280 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.78□□□□□ -1.484e-7■■□□□ 12.5
RPS11P62280 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC10.75□□□□□ -0.692e-15■■□□□ 12.3
RPS11P62280 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.381e-323■■□□□ 12.1
RPS11P62280 RNA5SP389-201ENST00000362610 115 ntBASIC6.6□□□□□ -1.351e-323■■□□□ 12
RPS11P62280 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.43■□□□□ 0.862e-6■■□□□ 11.6
RPS11P62280 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.682e-6■■□□□ 11.6
RPS11P62280 C22orf39-204ENST00000509549 2979 ntTSL 210.65□□□□□ -0.72e-6■■□□□ 11.6
RPS11P62280 HIRA-203ENST00000452818 453 ntTSL 58.9□□□□□ -0.982e-6■■□□□ 11.6
RPS11P62280 RNA5SP370-201ENST00000362545 121 ntBASIC9.93□□□□□ -0.821e-323■■□□□ 11.6
RPS11P62280 TOP3B-206ENST00000436282 2890 ntTSL 213.77□□□□□ -0.212e-6■■□□□ 11.5
RPS11P62280 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.252e-6■■□□□ 11.5
RPS11P62280 TOP3B-214ENST00000457270 2956 ntTSL 513.03□□□□□ -0.322e-6■■□□□ 11.5
RPS11P62280 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC12.47□□□□□ -0.412e-6■■□□□ 11.5
RPS11P62280 TOP3B-213ENST00000457179 3061 ntTSL 512.23□□□□□ -0.452e-6■■□□□ 11.5
RPS11P62280 TOP3B-215ENST00000470338 624 ntTSL 511.58□□□□□ -0.562e-6■■□□□ 11.5
RPS11P62280 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.582e-6■■□□□ 11.5
RPS11P62280 TOP3B-210ENST00000444502 4163 ntTSL 29.31□□□□□ -0.922e-6■■□□□ 11.5
RPS11P62280 MT-TH-201ENST00000387441 69 ntBASIC1.59□□□□□ -2.151e-323■■□□□ 11.5
RPS11P62280 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.394e-6■■□□□ 11.4
RPS11P62280 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.584e-6■■□□□ 11.4
RPS11P62280 FLNA-206ENST00000420627 8225 ntTSL 511.4□□□□□ -0.584e-6■■□□□ 11.4
RPS11P62280 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.614e-6■■□□□ 11.4
RPS11P62280 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.694e-6■■□□□ 11.4
RPS11P62280 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.754e-6■■□□□ 11.4
RPS11P62280 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC10.2□□□□□ -0.784e-6■■□□□ 11.4
RPS11P62280 RNA5SP481-201ENST00000516814 122 ntBASIC0.88□□□□□ -2.274e-28■□□□□ 11.2
RPS11P62280 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.73e-7■□□□□ 11.2
RPS11P62280 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)18.05■□□□□ 0.483e-7■□□□□ 11.2
RPS11P62280 BLVRB-203ENST00000597870 1392 ntTSL 515.46■□□□□ 0.073e-7■□□□□ 11.2
RPS11P62280 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.553e-7■□□□□ 11.2
RPS11P62280 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC11.35□□□□□ -0.593e-7■□□□□ 11.2
RPS11P62280 BLVRB-204ENST00000601346 676 ntTSL 210.08□□□□□ -0.83e-7■□□□□ 11.2
RPS11P62280 FUS-203ENST00000474990 827 ntTSL 317.86■□□□□ 0.455e-19■□□□□ 11.1
RPS11P62280 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.4■□□□□ 0.541e-7■□□□□ 10.8
RPS11P62280 MIR17HG-203ENST00000582141 2845 ntTSL 1 (best)16.07■□□□□ 0.161e-7■□□□□ 10.8
RPS11P62280 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.28□□□□□ -1.241e-7■□□□□ 10.8
RPS11P62280 COX7B-202ENST00000475465 685 ntTSL 27.18□□□□□ -1.267e-6■□□□□ 10.6
RPS11P62280 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.58□□□□□ -1.367e-6■□□□□ 10.6
RPS11P62280 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.477e-6■□□□□ 10.6
RPS11P62280 COX7B-201ENST00000373335 497 ntTSL 21.69□□□□□ -2.147e-6■□□□□ 10.6
RPS11P62280 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.628e-6■□□□□ 10.6
RPS11P62280 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.25■□□□□ 0.998e-6■□□□□ 10.6
RPS11P62280 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.82■□□□□ 0.928e-6■□□□□ 10.6
RPS11P62280 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.478e-6■□□□□ 10.6
RPS11P62280 TXNRD2-209ENST00000474308 1854 ntTSL 216.63■□□□□ 0.258e-6■□□□□ 10.6
RPS11P62280 TXNRD2-217ENST00000496729 910 ntTSL 415.66■□□□□ 0.18e-6■□□□□ 10.6
RPS11P62280 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.048e-6■□□□□ 10.6
RPS11P62280 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.168e-6■□□□□ 10.6
RPS11P62280 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.288e-6■□□□□ 10.6
RPS11P62280 LENG8-203ENST00000421200 594 ntTSL 313.09□□□□□ -0.318e-6■□□□□ 10.6
RPS11P62280 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.558e-6■□□□□ 10.6
RPS11P62280 FAM234B-202ENST00000416494 2623 ntTSL 210.34□□□□□ -0.751e-73■□□□□ 10.5
RPS11P62280 FAM234B-201ENST00000197268 4808 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.981e-73■□□□□ 10.5
RPS11P62280 UBR4-205ENST00000417040 6175 ntTSL 510.34□□□□□ -0.755e-6■□□□□ 10.5
RPS11P62280 UBR4-206ENST00000419533 5583 ntTSL 57.12□□□□□ -1.275e-6■□□□□ 10.5
RPS11P62280 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.465e-6■□□□□ 10.5
RPS11P62280 MT-TI-201ENST00000387365 69 ntBASIC-0.11□□□□□ -2.431e-323■□□□□ 10.2
RPS11P62280 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.071e-7■□□□□ 9.6
RPS11P62280 AES-203ENST00000585557 491 ntTSL 522.8■■□□□ 1.241e-7■□□□□ 9.6
RPS11P62280 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.545e-6■□□□□ 9.6
RPS11P62280 MICALL2-204ENST00000467394 2080 ntTSL 218.26■□□□□ 0.511e-7■□□□□ 9.6
RPS11P62280 MICALL2-209ENST00000479007 1855 ntTSL 217.62■□□□□ 0.411e-7■□□□□ 9.6
RPS11P62280 PRSS21-208ENST00000575199 679 ntTSL 217.51■□□□□ 0.395e-6■□□□□ 9.6
RPS11P62280 AES-206ENST00000586742 1666 ntTSL 315.89■□□□□ 0.131e-7■□□□□ 9.6
RPS11P62280 MICALL2-215ENST00000496184 2722 ntTSL 215.88■□□□□ 0.131e-7■□□□□ 9.6
RPS11P62280 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.67■□□□□ 0.11e-7■□□□□ 9.6
RPS11P62280 PRSS21-207ENST00000574813 873 ntTSL 315.57■□□□□ 0.085e-6■□□□□ 9.6
RPS11P62280 PRSS21-210ENST00000577043 814 ntTSL 515.51■□□□□ 0.075e-6■□□□□ 9.6
RPS11P62280 MICALL2-208ENST00000472100 5248 ntTSL 215.48■□□□□ 0.071e-7■□□□□ 9.6
RPS11P62280 PRSS21-205ENST00000571141 484 ntTSL 215.24■□□□□ 0.035e-6■□□□□ 9.6
RPS11P62280 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.021e-7■□□□□ 9.6
RPS11P62280 MICALL2-205ENST00000467783 639 ntTSL 314.74□□□□□ -0.051e-7■□□□□ 9.6
Retrieved 100 of 539 protein–RNA pairs in 11.9 ms