Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YLR122CYLR122C 378 nt10.3□□□□□ -0.76
CAF120P53836 PET20YPL159C 762 nt10.3□□□□□ -0.76
CAF120P53836 YNR029CYNR029C 1290 nt10.29□□□□□ -0.76
CAF120P53836 BOR1YNL275W 1731 nt10.29□□□□□ -0.76
CAF120P53836 PHO89YBR296C 1725 nt10.28□□□□□ -0.76
CAF120P53836 YEL009C-AYEL009C-A 408 nt10.28□□□□□ -0.76
CAF120P53836 YLR111WYLR111W 333 nt10.28□□□□□ -0.76
CAF120P53836 ABZ2YMR289W 1125 nt10.27□□□□□ -0.77
CAF120P53836 RET2YFR051C 1641 nt10.26□□□□□ -0.77
CAF120P53836 STE4YOR212W 1272 nt10.24□□□□□ -0.77
CAF120P53836 HSP60YLR259C 1719 nt10.24□□□□□ -0.77
CAF120P53836 FUR4YBR021W 1902 nt10.23□□□□□ -0.77
CAF120P53836 HHO1YPL127C 777 nt10.22□□□□□ -0.77
CAF120P53836 SHM2YLR058C 1410 nt10.21□□□□□ -0.78
CAF120P53836 MCH5YOR306C 1566 nt10.21□□□□□ -0.78
CAF120P53836 AGP1YCL025C 1902 nt10.21□□□□□ -0.78
CAF120P53836 MRP20YDR405W 792 nt10.2□□□□□ -0.78
CAF120P53836 YLR349WYLR349W 507 nt10.18□□□□□ -0.78
CAF120P53836 XDJ1YLR090W 1380 nt10.17□□□□□ -0.78
CAF120P53836 YGR201CYGR201C 678 nt10.17□□□□□ -0.78
CAF120P53836 SGT2YOR007C 1041 nt10.15□□□□□ -0.78
CAF120P53836 ADH7YCR105W 1086 nt10.14□□□□□ -0.79
CAF120P53836 snR78snR78 87 nt10.14□□□□□ -0.79
CAF120P53836 ATP6Q0085 780 nt10.14□□□□□ -0.79
CAF120P53836 PAU15YIR041W 375 nt10.14□□□□□ -0.79
CAF120P53836 UTP6YDR449C 1323 nt10.13□□□□□ -0.79
CAF120P53836 YNR068CYNR068C 819 nt10.13□□□□□ -0.79
CAF120P53836 NIT1YIL164C 600 nt10.11□□□□□ -0.79
CAF120P53836 DUS1YML080W 1272 nt10.11□□□□□ -0.79
CAF120P53836 GDH3YAL062W 1374 nt10.11□□□□□ -0.79
CAF120P53836 COQ2YNR041C 1119 nt10.1□□□□□ -0.79
CAF120P53836 AIR1YIL079C 1083 nt10.09□□□□□ -0.79
CAF120P53836 FUN14YAL008W 597 nt10.09□□□□□ -0.79
CAF120P53836 YCL074WYCL074W 927 nt10.08□□□□□ -0.8
CAF120P53836 RAD23YEL037C 1197 nt10.06□□□□□ -0.8
CAF120P53836 SKG1YKR100C 1068 nt10.06□□□□□ -0.8
CAF120P53836 SDH5YOL071W 489 nt10.06□□□□□ -0.8
CAF120P53836 AVT6YER119C 1347 nt10.06□□□□□ -0.8
CAF120P53836 PRP4YPR178W 1398 nt10.05□□□□□ -0.8
CAF120P53836 DUT1YBR252W 444 nt10.04□□□□□ -0.8
CAF120P53836 YLR437C-AYLR437C-A 228 nt10.03□□□□□ -0.8
CAF120P53836 RPL4BYDR012W 1089 nt10.02□□□□□ -0.81
CAF120P53836 GOR1YNL274C 1053 nt10.02□□□□□ -0.81
CAF120P53836 RPL4AYBR031W 1089 nt10.02□□□□□ -0.81
CAF120P53836 YJL195CYJL195C 702 nt10.01□□□□□ -0.81
CAF120P53836 YPL168WYPL168W 1293 nt10.01□□□□□ -0.81
CAF120P53836 YLR279WYLR279W 390 nt10□□□□□ -0.81
CAF120P53836 YKR005CYKR005C 1578 nt10□□□□□ -0.81
CAF120P53836 DPS1YLL018C 1674 nt9.99□□□□□ -0.81
CAF120P53836 STR3YGL184C 1398 nt9.99□□□□□ -0.81
CAF120P53836 CLB6YGR109C 1143 nt9.98□□□□□ -0.81
CAF120P53836 MET8YBR213W 825 nt9.98□□□□□ -0.81
CAF120P53836 RDN18-1RDN18-1 1800 nt9.98□□□□□ -0.81
CAF120P53836 RDN18-2RDN18-2 1800 nt9.98□□□□□ -0.81
CAF120P53836 TOM20YGR082W 552 nt9.97□□□□□ -0.81
CAF120P53836 SFA1YDL168W 1161 nt9.95□□□□□ -0.82
CAF120P53836 BMT6YLR063W 1098 nt9.95□□□□□ -0.82
CAF120P53836 KTR3YBR205W 1215 nt9.95□□□□□ -0.82
CAF120P53836 RIB3YDR487C 627 nt9.94□□□□□ -0.82
CAF120P53836 YGR259CYGR259C 441 nt9.93□□□□□ -0.82
CAF120P53836 RPS14BYJL191W 417 nt9.93□□□□□ -0.82
CAF120P53836 AAC1YMR056C 930 nt9.93□□□□□ -0.82
CAF120P53836 ALG12YNR030W 1656 nt9.93□□□□□ -0.82
CAF120P53836 ESS1YJR017C 513 nt9.92□□□□□ -0.82
CAF120P53836 tS(GCU)LtS(GCU)L 80 nt9.91□□□□□ -0.82
CAF120P53836 AQY2YLL052C 450 nt9.91□□□□□ -0.82
CAF120P53836 GPN2YOR262W 1044 nt9.91□□□□□ -0.82
CAF120P53836 YHL019W-AYHL019W-A 594 nt9.89□□□□□ -0.83
CAF120P53836 NEM1YHR004C 1341 nt9.88□□□□□ -0.83
CAF120P53836 YCR102CYCR102C 1107 nt9.88□□□□□ -0.83
CAF120P53836 CAB5YDR196C 726 nt9.88□□□□□ -0.83
CAF120P53836 LCP5YER127W 1074 nt9.87□□□□□ -0.83
CAF120P53836 CPD1YGR247W 720 nt9.87□□□□□ -0.83
CAF120P53836 ADH1YOL086C 1047 nt9.87□□□□□ -0.83
CAF120P53836 TSC10YBR265W 963 nt9.87□□□□□ -0.83
CAF120P53836 YGR012WYGR012W 1182 nt9.86□□□□□ -0.83
CAF120P53836 UTH1YKR042W 1098 nt9.86□□□□□ -0.83
CAF120P53836 YPL071CYPL071C 471 nt9.86□□□□□ -0.83
CAF120P53836 YEL008WYEL008W 381 nt9.85□□□□□ -0.83
CAF120P53836 IRC24YIR036C 792 nt9.84□□□□□ -0.83
CAF120P53836 NAP1YKR048C 1254 nt9.84□□□□□ -0.83
CAF120P53836 URE2YNL229C 1065 nt9.84□□□□□ -0.83
CAF120P53836 SNF1YDR477W 1902 nt9.84□□□□□ -0.83
CAF120P53836 HMT1YBR034C 1047 nt9.83□□□□□ -0.84
CAF120P53836 RTN2YDL204W 1182 nt9.82□□□□□ -0.84
CAF120P53836 PUP1YOR157C 786 nt9.81□□□□□ -0.84
CAF120P53836 NBP35YGL091C 987 nt9.8□□□□□ -0.84
CAF120P53836 SEN2YLR105C 1134 nt9.8□□□□□ -0.84
CAF120P53836 YPI1YFR003C 468 nt9.78□□□□□ -0.84
CAF120P53836 PHO92YDR374C 921 nt9.77□□□□□ -0.85
CAF120P53836 URH1YDR400W 1023 nt9.77□□□□□ -0.85
CAF120P53836 BIO5YNR056C 1686 nt9.76□□□□□ -0.85
CAF120P53836 YPL222C-AYPL222C-A 246 nt9.74□□□□□ -0.85
CAF120P53836 NRT1YOR071C 1797 nt9.73□□□□□ -0.85
CAF120P53836 ARP6YLR085C 1317 nt9.72□□□□□ -0.85
CAF120P53836 HIP1YGR191W 1812 nt9.72□□□□□ -0.85
CAF120P53836 TIR3YIL011W 810 nt9.71□□□□□ -0.86
CAF120P53836 TOM6YOR045W 186 nt9.71□□□□□ -0.86
CAF120P53836 STD1YOR047C 1335 nt9.71□□□□□ -0.86
CAF120P53836 PEX2YJL210W 816 nt9.69□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms