Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 SHH4YLR164W 507 nt10.34□□□□□ -0.75
RFX1P48743 YHL019W-AYHL019W-A 594 nt10.33□□□□□ -0.76
RFX1P48743 YCR087WYCR087W 516 nt10.3□□□□□ -0.76
RFX1P48743 CMP2YML057W 1815 nt10.28□□□□□ -0.76
RFX1P48743 ARP6YLR085C 1317 nt10.28□□□□□ -0.76
RFX1P48743 MRP20YDR405W 792 nt10.27□□□□□ -0.77
RFX1P48743 COQ2YNR041C 1119 nt10.27□□□□□ -0.77
RFX1P48743 PRO1YDR300C 1287 nt10.26□□□□□ -0.77
RFX1P48743 LSC2YGR244C 1284 nt10.26□□□□□ -0.77
RFX1P48743 PLB1YMR008C 1995 nt10.26□□□□□ -0.77
RFX1P48743 HSL7YBR133C 2484 nt10.26□□□□□ -0.77
RFX1P48743 POM34YLR018C 900 nt10.25□□□□□ -0.77
RFX1P48743 TOM6YOR045W 186 nt10.24□□□□□ -0.77
RFX1P48743 RBG1YAL036C 1110 nt10.23□□□□□ -0.77
RFX1P48743 AIM45YPR004C 1035 nt10.23□□□□□ -0.77
RFX1P48743 IRC24YIR036C 792 nt10.22□□□□□ -0.77
RFX1P48743 ATG15YCR068W 1563 nt10.21□□□□□ -0.78
RFX1P48743 SBA1YKL117W 651 nt10.2□□□□□ -0.78
RFX1P48743 GAP1YKR039W 1809 nt10.2□□□□□ -0.78
RFX1P48743 YML089CYML089C 369 nt10.2□□□□□ -0.78
RFX1P48743 NDI1YML120C 1542 nt10.19□□□□□ -0.78
RFX1P48743 PEX2YJL210W 816 nt10.18□□□□□ -0.78
RFX1P48743 RPL4BYDR012W 1089 nt10.14□□□□□ -0.79
RFX1P48743 CLB6YGR109C 1143 nt10.14□□□□□ -0.79
RFX1P48743 RPL4AYBR031W 1089 nt10.14□□□□□ -0.79
RFX1P48743 HIP1YGR191W 1812 nt10.13□□□□□ -0.79
RFX1P48743 YAT1YAR035W 2064 nt10.12□□□□□ -0.79
RFX1P48743 UTR1YJR049C 1593 nt10.11□□□□□ -0.79
RFX1P48743 TIF6YPR016C 738 nt10.11□□□□□ -0.79
RFX1P48743 UTH1YKR042W 1098 nt10.1□□□□□ -0.79
RFX1P48743 NRT1YOR071C 1797 nt10.08□□□□□ -0.8
RFX1P48743 GLR1YPL091W 1452 nt10.07□□□□□ -0.8
RFX1P48743 PRM5YIL117C 957 nt10.07□□□□□ -0.8
RFX1P48743 MET28YIR017C 564 nt10.07□□□□□ -0.8
RFX1P48743 RPS14BYJL191W 417 nt10.07□□□□□ -0.8
RFX1P48743 RDN25-1RDN25-1 3396 nt10.05□□□□□ -0.8
RFX1P48743 RDN25-2RDN25-2 3396 nt10.05□□□□□ -0.8
RFX1P48743 DIF1YLR437C 402 nt10.02□□□□□ -0.81
RFX1P48743 SAM35YHR083W 990 nt10.01□□□□□ -0.81
RFX1P48743 YMR244WYMR244W 1068 nt10.01□□□□□ -0.81
RFX1P48743 SDH5YOL071W 489 nt9.99□□□□□ -0.81
RFX1P48743 ALD4YOR374W 1560 nt9.97□□□□□ -0.81
RFX1P48743 YAR028WYAR028W 705 nt9.95□□□□□ -0.82
RFX1P48743 FIT3YOR383C 615 nt9.95□□□□□ -0.82
RFX1P48743 TSC10YBR265W 963 nt9.95□□□□□ -0.82
RFX1P48743 HEL2YDR266C 1920 nt9.95□□□□□ -0.82
RFX1P48743 HIF1YLL022C 1158 nt9.93□□□□□ -0.82
RFX1P48743 YLR111WYLR111W 333 nt9.91□□□□□ -0.82
RFX1P48743 MTG2YHR168W 1557 nt9.9□□□□□ -0.82
RFX1P48743 YGR012WYGR012W 1182 nt9.9□□□□□ -0.82
RFX1P48743 SPT20YOL148C 1815 nt9.89□□□□□ -0.83
RFX1P48743 ALP1YNL270C 1722 nt9.89□□□□□ -0.83
RFX1P48743 AKR2YOR034C 2250 nt9.88□□□□□ -0.83
RFX1P48743 YMR226CYMR226C 804 nt9.88□□□□□ -0.83
RFX1P48743 YLR279WYLR279W 390 nt9.87□□□□□ -0.83
RFX1P48743 ZTA1YBR046C 1005 nt9.87□□□□□ -0.83
RFX1P48743 RAD23YEL037C 1197 nt9.86□□□□□ -0.83
RFX1P48743 YER190C-AYER190C-A 576 nt9.86□□□□□ -0.83
RFX1P48743 YGR296C-AYGR296C-A 576 nt9.86□□□□□ -0.83
RFX1P48743 YML133W-AYML133W-A 576 nt9.86□□□□□ -0.83
RFX1P48743 YNL339W-AYNL339W-A 576 nt9.86□□□□□ -0.83
RFX1P48743 YPL283W-AYPL283W-A 576 nt9.86□□□□□ -0.83
RFX1P48743 RBG2YGR173W 1107 nt9.84□□□□□ -0.83
RFX1P48743 LIP1YMR298W 453 nt9.84□□□□□ -0.83
RFX1P48743 DBP1YPL119C 1854 nt9.83□□□□□ -0.84
RFX1P48743 HXT1YHR094C 1713 nt9.83□□□□□ -0.84
RFX1P48743 SED1YDR077W 1017 nt9.83□□□□□ -0.84
RFX1P48743 MSB4YOL112W 1479 nt9.83□□□□□ -0.84
RFX1P48743 RPC82YPR190C 1965 nt9.81□□□□□ -0.84
RFX1P48743 RIB3YDR487C 627 nt9.77□□□□□ -0.85
RFX1P48743 YPL222C-AYPL222C-A 246 nt9.77□□□□□ -0.85
RFX1P48743 RIM8YGL045W 1629 nt9.77□□□□□ -0.85
RFX1P48743 CAB5YDR196C 726 nt9.76□□□□□ -0.85
RFX1P48743 YBL086CYBL086C 1401 nt9.74□□□□□ -0.85
RFX1P48743 INA1YLR413W 2028 nt9.74□□□□□ -0.85
RFX1P48743 SAM1YLR180W 1149 nt9.73□□□□□ -0.85
RFX1P48743 YLR437C-AYLR437C-A 228 nt9.73□□□□□ -0.85
RFX1P48743 ZRT3YKL175W 1512 nt9.72□□□□□ -0.85
RFX1P48743 SHY1YGR112W 1170 nt9.71□□□□□ -0.86
RFX1P48743 TOA2YKL058W 369 nt9.71□□□□□ -0.86
RFX1P48743 YPL251WYPL251W 303 nt9.71□□□□□ -0.86
RFX1P48743 BRR1YPR057W 1026 nt9.71□□□□□ -0.86
RFX1P48743 NME1NME1 340 nt9.7□□□□□ -0.86
RFX1P48743 LEU9YOR108W 1815 nt9.69□□□□□ -0.86
RFX1P48743 YGL114WYGL114W 2178 nt9.68□□□□□ -0.86
RFX1P48743 UGA4YDL210W 1716 nt9.66□□□□□ -0.86
RFX1P48743 YMR103CYMR103C 363 nt9.66□□□□□ -0.86
RFX1P48743 MEP3YPR138C 1470 nt9.66□□□□□ -0.86
RFX1P48743 MUP1YGR055W 1725 nt9.65□□□□□ -0.86
RFX1P48743 FCY21YER060W 1587 nt9.65□□□□□ -0.86
RFX1P48743 GND1YHR183W 1470 nt9.64□□□□□ -0.87
RFX1P48743 LOT5YKL183W 921 nt9.63□□□□□ -0.87
RFX1P48743 RPM1RPM1 483 nt9.63□□□□□ -0.87
RFX1P48743 SMM1YNR015W 1155 nt9.63□□□□□ -0.87
RFX1P48743 GND2YGR256W 1479 nt9.63□□□□□ -0.87
RFX1P48743 APT2YDR441C 546 nt9.61□□□□□ -0.87
RFX1P48743 URA6YKL024C 615 nt9.61□□□□□ -0.87
RFX1P48743 UFO1YML088W 2007 nt9.61□□□□□ -0.87
RFX1P48743 MAE1YKL029C 2010 nt9.6□□□□□ -0.87
RFX1P48743 YJL067WYJL067W 351 nt9.6□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms