Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 PRP4YPR178W 1398 nt11.63□□□□□ -0.55
MSH4P40965 YCL074WYCL074W 927 nt11.62□□□□□ -0.55
MSH4P40965 STR3YGL184C 1398 nt11.62□□□□□ -0.55
MSH4P40965 RDN18-1RDN18-1 1800 nt11.62□□□□□ -0.55
MSH4P40965 RDN18-2RDN18-2 1800 nt11.62□□□□□ -0.55
MSH4P40965 RPM1RPM1 483 nt11.61□□□□□ -0.55
MSH4P40965 NBP35YGL091C 987 nt11.6□□□□□ -0.55
MSH4P40965 DPS1YLL018C 1674 nt11.59□□□□□ -0.55
MSH4P40965 AQY2YLL052C 450 nt11.58□□□□□ -0.56
MSH4P40965 HSL7YBR133C 2484 nt11.58□□□□□ -0.56
MSH4P40965 TIR3YIL011W 810 nt11.56□□□□□ -0.56
MSH4P40965 RPS14BYJL191W 417 nt11.56□□□□□ -0.56
MSH4P40965 UTH1YKR042W 1098 nt11.56□□□□□ -0.56
MSH4P40965 CMP2YML057W 1815 nt11.56□□□□□ -0.56
MSH4P40965 SHH4YLR164W 507 nt11.54□□□□□ -0.56
MSH4P40965 TOM6YOR045W 186 nt11.53□□□□□ -0.56
MSH4P40965 RAD23YEL037C 1197 nt11.52□□□□□ -0.57
MSH4P40965 AAC1YMR056C 930 nt11.52□□□□□ -0.57
MSH4P40965 YKR005CYKR005C 1578 nt11.52□□□□□ -0.57
MSH4P40965 SNF1YDR477W 1902 nt11.5□□□□□ -0.57
MSH4P40965 PEX2YJL210W 816 nt11.5□□□□□ -0.57
MSH4P40965 TSC10YBR265W 963 nt11.48□□□□□ -0.57
MSH4P40965 BIO5YNR056C 1686 nt11.47□□□□□ -0.57
MSH4P40965 NRT1YOR071C 1797 nt11.46□□□□□ -0.57
MSH4P40965 HIP1YGR191W 1812 nt11.45□□□□□ -0.58
MSH4P40965 YGR012WYGR012W 1182 nt11.45□□□□□ -0.58
MSH4P40965 POM34YLR018C 900 nt11.44□□□□□ -0.58
MSH4P40965 YML089CYML089C 369 nt11.44□□□□□ -0.58
MSH4P40965 PRO1YDR300C 1287 nt11.42□□□□□ -0.58
MSH4P40965 ATG15YCR068W 1563 nt11.41□□□□□ -0.58
MSH4P40965 LSC2YGR244C 1284 nt11.4□□□□□ -0.58
MSH4P40965 ARP6YLR085C 1317 nt11.39□□□□□ -0.59
MSH4P40965 YGR259CYGR259C 441 nt11.39□□□□□ -0.59
MSH4P40965 MET28YIR017C 564 nt11.39□□□□□ -0.59
MSH4P40965 RDN25-1RDN25-1 3396 nt11.39□□□□□ -0.59
MSH4P40965 RDN25-2RDN25-2 3396 nt11.39□□□□□ -0.59
MSH4P40965 CYT2YKL087C 675 nt11.39□□□□□ -0.59
MSH4P40965 YLR437C-AYLR437C-A 228 nt11.39□□□□□ -0.59
MSH4P40965 HEL2YDR266C 1920 nt11.39□□□□□ -0.59
MSH4P40965 RTN2YDL204W 1182 nt11.38□□□□□ -0.59
MSH4P40965 YGR139WYGR139W 339 nt11.38□□□□□ -0.59
MSH4P40965 BMT6YLR063W 1098 nt11.38□□□□□ -0.59
MSH4P40965 PBP1YGR178C 2169 nt11.37□□□□□ -0.59
MSH4P40965 RIB3YDR487C 627 nt11.37□□□□□ -0.59
MSH4P40965 TIF6YPR016C 738 nt11.34□□□□□ -0.59
MSH4P40965 RAD51YER095W 1203 nt11.33□□□□□ -0.6
MSH4P40965 CAB5YDR196C 726 nt11.32□□□□□ -0.6
MSH4P40965 STE4YOR212W 1272 nt11.32□□□□□ -0.6
MSH4P40965 PLB1YMR008C 1995 nt11.31□□□□□ -0.6
MSH4P40965 YLR279WYLR279W 390 nt11.3□□□□□ -0.6
MSH4P40965 IRC24YIR036C 792 nt11.29□□□□□ -0.6
MSH4P40965 FIT3YOR383C 615 nt11.29□□□□□ -0.6
MSH4P40965 FRE6YLL051C 2139 nt11.28□□□□□ -0.6
MSH4P40965 NME1NME1 340 nt11.28□□□□□ -0.6
MSH4P40965 YPL222C-AYPL222C-A 246 nt11.28□□□□□ -0.6
MSH4P40965 GAP1YKR039W 1809 nt11.28□□□□□ -0.6
MSH4P40965 MSB4YOL112W 1479 nt11.25□□□□□ -0.61
MSH4P40965 YJL195CYJL195C 702 nt11.25□□□□□ -0.61
MSH4P40965 FUN14YAL008W 597 nt11.24□□□□□ -0.61
MSH4P40965 YNR029CYNR029C 1290 nt11.24□□□□□ -0.61
MSH4P40965 ADH7YCR105W 1086 nt11.23□□□□□ -0.61
MSH4P40965 YLR349WYLR349W 507 nt11.22□□□□□ -0.61
MSH4P40965 PAU15YIR041W 375 nt11.19□□□□□ -0.62
MSH4P40965 YPI1YFR003C 468 nt11.18□□□□□ -0.62
MSH4P40965 ADH1YOL086C 1047 nt11.17□□□□□ -0.62
MSH4P40965 LOT5YKL183W 921 nt11.16□□□□□ -0.62
MSH4P40965 UTR1YJR049C 1593 nt11.16□□□□□ -0.62
MSH4P40965 DIF1YLR437C 402 nt11.13□□□□□ -0.63
MSH4P40965 GND1YHR183W 1470 nt11.12□□□□□ -0.63
MSH4P40965 MET2YNL277W 1461 nt11.12□□□□□ -0.63
MSH4P40965 GPN2YOR262W 1044 nt11.11□□□□□ -0.63
MSH4P40965 YAR028WYAR028W 705 nt11.1□□□□□ -0.63
MSH4P40965 ALP1YNL270C 1722 nt11.09□□□□□ -0.63
MSH4P40965 YAT1YAR035W 2064 nt11.09□□□□□ -0.63
MSH4P40965 AKR2YOR034C 2250 nt11.09□□□□□ -0.63
MSH4P40965 YEL008WYEL008W 381 nt11.06□□□□□ -0.64
MSH4P40965 PRM5YIL117C 957 nt11.06□□□□□ -0.64
MSH4P40965 APT2YDR441C 546 nt11.05□□□□□ -0.64
MSH4P40965 ZTA1YBR046C 1005 nt11.05□□□□□ -0.64
MSH4P40965 SFP1YLR403W 2052 nt11.03□□□□□ -0.64
MSH4P40965 CPD1YGR247W 720 nt11.02□□□□□ -0.65
MSH4P40965 MTG2YHR168W 1557 nt11.02□□□□□ -0.65
MSH4P40965 SMM1YNR015W 1155 nt11.01□□□□□ -0.65
MSH4P40965 SAM35YHR083W 990 nt11□□□□□ -0.65
MSH4P40965 tS(GCU)LtS(GCU)L 80 nt10.99□□□□□ -0.65
MSH4P40965 LSB3YFR024C-A 1380 nt10.99□□□□□ -0.65
MSH4P40965 RIM8YGL045W 1629 nt10.94□□□□□ -0.66
MSH4P40965 RIB2YOL066C 1776 nt10.93□□□□□ -0.66
MSH4P40965 MAE1YKL029C 2010 nt10.92□□□□□ -0.66
MSH4P40965 ESS1YJR017C 513 nt10.92□□□□□ -0.66
MSH4P40965 FCY21YER060W 1587 nt10.91□□□□□ -0.66
MSH4P40965 SED1YDR077W 1017 nt10.91□□□□□ -0.66
MSH4P40965 YER190C-AYER190C-A 576 nt10.9□□□□□ -0.66
MSH4P40965 YGR296C-AYGR296C-A 576 nt10.9□□□□□ -0.66
MSH4P40965 YML133W-AYML133W-A 576 nt10.9□□□□□ -0.66
MSH4P40965 YNL339W-AYNL339W-A 576 nt10.9□□□□□ -0.66
MSH4P40965 YPL283W-AYPL283W-A 576 nt10.9□□□□□ -0.66
MSH4P40965 ALD4YOR374W 1560 nt10.9□□□□□ -0.67
MSH4P40965 NPP1YCR026C 2229 nt10.89□□□□□ -0.67
MSH4P40965 SPT20YOL148C 1815 nt10.89□□□□□ -0.67
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms