Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 ADH7YCR105W 1086 nt10.33□□□□□ -0.76
PEX28P38848 FUN14YAL008W 597 nt10.33□□□□□ -0.76
PEX28P38848 TSC10YBR265W 963 nt10.32□□□□□ -0.76
PEX28P38848 RIB3YDR487C 627 nt10.31□□□□□ -0.76
PEX28P38848 YGR012WYGR012W 1182 nt10.3□□□□□ -0.76
PEX28P38848 PIB2YGL023C 1908 nt10.29□□□□□ -0.76
PEX28P38848 PAU15YIR041W 375 nt10.28□□□□□ -0.76
PEX28P38848 CAB5YDR196C 726 nt10.27□□□□□ -0.77
PEX28P38848 TIR3YIL011W 810 nt10.27□□□□□ -0.77
PEX28P38848 YJL195CYJL195C 702 nt10.27□□□□□ -0.77
PEX28P38848 UME6YDR207C 2511 nt10.27□□□□□ -0.77
PEX28P38848 YLR279WYLR279W 390 nt10.25□□□□□ -0.77
PEX28P38848 SHH4YLR164W 507 nt10.23□□□□□ -0.77
PEX28P38848 ARO7YPR060C 771 nt10.23□□□□□ -0.77
PEX28P38848 DUT1YBR252W 444 nt10.23□□□□□ -0.77
PEX28P38848 HIP1YGR191W 1812 nt10.23□□□□□ -0.77
PEX28P38848 NRT1YOR071C 1797 nt10.21□□□□□ -0.77
PEX28P38848 PTK1YKL198C 1989 nt10.21□□□□□ -0.77
PEX28P38848 TOM6YOR045W 186 nt10.21□□□□□ -0.77
PEX28P38848 NBP35YGL091C 987 nt10.2□□□□□ -0.78
PEX28P38848 PEX2YJL210W 816 nt10.2□□□□□ -0.78
PEX28P38848 AGP1YCL025C 1902 nt10.19□□□□□ -0.78
PEX28P38848 YML089CYML089C 369 nt10.18□□□□□ -0.78
PEX28P38848 ADH1YOL086C 1047 nt10.18□□□□□ -0.78
PEX28P38848 POM34YLR018C 900 nt10.16□□□□□ -0.78
PEX28P38848 MET28YIR017C 564 nt10.15□□□□□ -0.78
PEX28P38848 YPI1YFR003C 468 nt10.14□□□□□ -0.79
PEX28P38848 YPL222C-AYPL222C-A 246 nt10.13□□□□□ -0.79
PEX28P38848 CCA1YER168C 1641 nt10.12□□□□□ -0.79
PEX28P38848 YEL008WYEL008W 381 nt10.12□□□□□ -0.79
PEX28P38848 LSC2YGR244C 1284 nt10.12□□□□□ -0.79
PEX28P38848 GPN2YOR262W 1044 nt10.12□□□□□ -0.79
PEX28P38848 YFL054CYFL054C 1941 nt10.11□□□□□ -0.79
PEX28P38848 CPD1YGR247W 720 nt10.11□□□□□ -0.79
PEX28P38848 ESS1YJR017C 513 nt10.11□□□□□ -0.79
PEX28P38848 TIF6YPR016C 738 nt10.1□□□□□ -0.79
PEX28P38848 tS(GCU)LtS(GCU)L 80 nt10.09□□□□□ -0.79
PEX28P38848 FIT3YOR383C 615 nt10.09□□□□□ -0.79
PEX28P38848 MSB4YOL112W 1479 nt10.09□□□□□ -0.79
PEX28P38848 PRO1YDR300C 1287 nt10.07□□□□□ -0.8
PEX28P38848 ATG15YCR068W 1563 nt10.05□□□□□ -0.8
PEX28P38848 YJR154WYJR154W 1041 nt10.04□□□□□ -0.8
PEX28P38848 LOT5YKL183W 921 nt10.03□□□□□ -0.8
PEX28P38848 Q0010Q0010 387 nt10.03□□□□□ -0.8
PEX28P38848 GND1YHR183W 1470 nt10.02□□□□□ -0.81
PEX28P38848 NAP1YKR048C 1254 nt10□□□□□ -0.81
PEX28P38848 DUS1YML080W 1272 nt10□□□□□ -0.81
PEX28P38848 AQY2YLL052C 450 nt9.98□□□□□ -0.81
PEX28P38848 AAC1YMR056C 930 nt9.98□□□□□ -0.81
PEX28P38848 STR3YGL184C 1398 nt9.98□□□□□ -0.81
PEX28P38848 SEN2YLR105C 1134 nt9.95□□□□□ -0.82
PEX28P38848 FRE6YLL051C 2139 nt9.94□□□□□ -0.82
PEX28P38848 PUP1YOR157C 786 nt9.94□□□□□ -0.82
PEX28P38848 SWE1YJL187C 2460 nt9.92□□□□□ -0.82
PEX28P38848 YEL009C-AYEL009C-A 408 nt9.92□□□□□ -0.82
PEX28P38848 ARP6YLR085C 1317 nt9.91□□□□□ -0.82
PEX28P38848 APT2YDR441C 546 nt9.9□□□□□ -0.82
PEX28P38848 RDN18-1RDN18-1 1800 nt9.9□□□□□ -0.82
PEX28P38848 RDN18-2RDN18-2 1800 nt9.9□□□□□ -0.82
PEX28P38848 GAP1YKR039W 1809 nt9.89□□□□□ -0.83
PEX28P38848 YCL074WYCL074W 927 nt9.88□□□□□ -0.83
PEX28P38848 LSB3YFR024C-A 1380 nt9.86□□□□□ -0.83
PEX28P38848 ALP1YNL270C 1722 nt9.85□□□□□ -0.83
PEX28P38848 SMM1YNR015W 1155 nt9.85□□□□□ -0.83
PEX28P38848 YAR028WYAR028W 705 nt9.83□□□□□ -0.84
PEX28P38848 PGC1YPL206C 966 nt9.82□□□□□ -0.84
PEX28P38848 RIB2YOL066C 1776 nt9.81□□□□□ -0.84
PEX28P38848 REG2YBR050C 1017 nt9.81□□□□□ -0.84
PEX28P38848 YBR232CYBR232C 360 nt9.81□□□□□ -0.84
PEX28P38848 FCY21YER060W 1587 nt9.8□□□□□ -0.84
PEX28P38848 AKR2YOR034C 2250 nt9.79□□□□□ -0.84
PEX28P38848 ZTA1YBR046C 1005 nt9.79□□□□□ -0.84
PEX28P38848 PAU5YFL020C 369 nt9.78□□□□□ -0.84
PEX28P38848 BOR1YNL275W 1731 nt9.77□□□□□ -0.85
PEX28P38848 RTN2YDL204W 1182 nt9.77□□□□□ -0.85
PEX28P38848 STP3YLR375W 1032 nt9.77□□□□□ -0.85
PEX28P38848 DIF1YLR437C 402 nt9.77□□□□□ -0.85
PEX28P38848 HXT12YIL170W 1374 nt9.76□□□□□ -0.85
PEX28P38848 MTG2YHR168W 1557 nt9.76□□□□□ -0.85
PEX28P38848 PLB1YMR008C 1995 nt9.74□□□□□ -0.85
PEX28P38848 PAB1YER165W 1734 nt9.73□□□□□ -0.85
PEX28P38848 YJL064WYJL064W 396 nt9.73□□□□□ -0.85
PEX28P38848 TIM44YIL022W 1296 nt9.72□□□□□ -0.85
PEX28P38848 PRY1YJL079C 900 nt9.71□□□□□ -0.86
PEX28P38848 PAU19YMR325W 375 nt9.71□□□□□ -0.86
PEX28P38848 ALD4YOR374W 1560 nt9.7□□□□□ -0.86
PEX28P38848 VRG4YGL225W 1014 nt9.69□□□□□ -0.86
PEX28P38848 YJR114WYJR114W 393 nt9.69□□□□□ -0.86
PEX28P38848 MCH5YOR306C 1566 nt9.69□□□□□ -0.86
PEX28P38848 ARA2YMR041C 1008 nt9.67□□□□□ -0.86
PEX28P38848 CCT5YJR064W 1689 nt9.66□□□□□ -0.86
PEX28P38848 LCP5YER127W 1074 nt9.64□□□□□ -0.87
PEX28P38848 YLR122CYLR122C 378 nt9.64□□□□□ -0.87
PEX28P38848 SLG1YOR008C 1137 nt9.63□□□□□ -0.87
PEX28P38848 UTR1YJR049C 1593 nt9.63□□□□□ -0.87
PEX28P38848 URH1YDR400W 1023 nt9.62□□□□□ -0.87
PEX28P38848 UGA4YDL210W 1716 nt9.61□□□□□ -0.87
PEX28P38848 YJL055WYJL055W 738 nt9.6□□□□□ -0.87
PEX28P38848 SED1YDR077W 1017 nt9.59□□□□□ -0.87
PEX28P38848 TAF13YML098W 504 nt9.59□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms