Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 RPS14BYJL191W 417 nt9.66□□□□□ -0.86
RPL40BP0CH09 ERG6YML008C 1152 nt9.65□□□□□ -0.86
RPL40BP0CH09 XDJ1YLR090W 1380 nt9.63□□□□□ -0.87
RPL40BP0CH09 YPI1YFR003C 468 nt9.63□□□□□ -0.87
RPL40BP0CH09 YGR012WYGR012W 1182 nt9.63□□□□□ -0.87
RPL40BP0CH09 YJL064WYJL064W 396 nt9.63□□□□□ -0.87
RPL40BP0CH09 LYS4YDR234W 2082 nt9.62□□□□□ -0.87
RPL40BP0CH09 ALG12YNR030W 1656 nt9.61□□□□□ -0.87
RPL40BP0CH09 TSC10YBR265W 963 nt9.61□□□□□ -0.87
RPL40BP0CH09 MCH5YOR306C 1566 nt9.6□□□□□ -0.87
RPL40BP0CH09 CRR1YLR213C 1269 nt9.6□□□□□ -0.87
RPL40BP0CH09 PAU19YMR325W 375 nt9.6□□□□□ -0.87
RPL40BP0CH09 SLG1YOR008C 1137 nt9.6□□□□□ -0.87
RPL40BP0CH09 YBR232CYBR232C 360 nt9.6□□□□□ -0.87
RPL40BP0CH09 SFA1YDL168W 1161 nt9.58□□□□□ -0.88
RPL40BP0CH09 PGC1YPL206C 966 nt9.58□□□□□ -0.88
RPL40BP0CH09 SOD2YHR008C 702 nt9.57□□□□□ -0.88
RPL40BP0CH09 SNG1YGR197C 1644 nt9.56□□□□□ -0.88
RPL40BP0CH09 QDR2YIL121W 1629 nt9.56□□□□□ -0.88
RPL40BP0CH09 UTH1YKR042W 1098 nt9.55□□□□□ -0.88
RPL40BP0CH09 YHL019W-AYHL019W-A 594 nt9.54□□□□□ -0.88
RPL40BP0CH09 PAU5YFL020C 369 nt9.53□□□□□ -0.88
RPL40BP0CH09 GDH3YAL062W 1374 nt9.52□□□□□ -0.88
RPL40BP0CH09 YIA6YIL006W 1122 nt9.52□□□□□ -0.89
RPL40BP0CH09 HEM12YDR047W 1089 nt9.5□□□□□ -0.89
RPL40BP0CH09 STP3YLR375W 1032 nt9.5□□□□□ -0.89
RPL40BP0CH09 FUR4YBR021W 1902 nt9.48□□□□□ -0.89
RPL40BP0CH09 YPL222C-AYPL222C-A 246 nt9.45□□□□□ -0.9
RPL40BP0CH09 AAC1YMR056C 930 nt9.44□□□□□ -0.9
RPL40BP0CH09 MIC10YCL057C-A 294 nt9.44□□□□□ -0.9
RPL40BP0CH09 POP2YNR052C 1302 nt9.44□□□□□ -0.9
RPL40BP0CH09 LOT5YKL183W 921 nt9.41□□□□□ -0.9
RPL40BP0CH09 YHR056W-AYHR056W-A 435 nt9.4□□□□□ -0.9
RPL40BP0CH09 PRP4YPR178W 1398 nt9.38□□□□□ -0.91
RPL40BP0CH09 NRT1YOR071C 1797 nt9.38□□□□□ -0.91
RPL40BP0CH09 GND1YHR183W 1470 nt9.37□□□□□ -0.91
RPL40BP0CH09 TIP1YBR067C 633 nt9.37□□□□□ -0.91
RPL40BP0CH09 MSB4YOL112W 1479 nt9.36□□□□□ -0.91
RPL40BP0CH09 YER152W-AYER152W-A 567 nt9.36□□□□□ -0.91
RPL40BP0CH09 BNA2YJR078W 1362 nt9.36□□□□□ -0.91
RPL40BP0CH09 YCR102CYCR102C 1107 nt9.35□□□□□ -0.91
RPL40BP0CH09 NAR1YNL240C 1476 nt9.34□□□□□ -0.91
RPL40BP0CH09 CCA1YER168C 1641 nt9.34□□□□□ -0.91
RPL40BP0CH09 HIP1YGR191W 1812 nt9.33□□□□□ -0.92
RPL40BP0CH09 DPS1YLL018C 1674 nt9.33□□□□□ -0.92
RPL40BP0CH09 YGR201CYGR201C 678 nt9.33□□□□□ -0.92
RPL40BP0CH09 PEX2YJL210W 816 nt9.31□□□□□ -0.92
RPL40BP0CH09 AVT6YER119C 1347 nt9.31□□□□□ -0.92
RPL40BP0CH09 RAX1YOR301W 1308 nt9.31□□□□□ -0.92
RPL40BP0CH09 BUD20YLR074C 501 nt9.3□□□□□ -0.92
RPL40BP0CH09 MIC12YBR262C 321 nt9.3□□□□□ -0.92
RPL40BP0CH09 TOM6YOR045W 186 nt9.29□□□□□ -0.92
RPL40BP0CH09 APT2YDR441C 546 nt9.27□□□□□ -0.93
RPL40BP0CH09 MET28YIR017C 564 nt9.25□□□□□ -0.93
RPL40BP0CH09 SHH4YLR164W 507 nt9.24□□□□□ -0.93
RPL40BP0CH09 TOS1YBR162C 1368 nt9.24□□□□□ -0.93
RPL40BP0CH09 TIR3YIL011W 810 nt9.23□□□□□ -0.93
RPL40BP0CH09 HHO1YPL127C 777 nt9.23□□□□□ -0.93
RPL40BP0CH09 YKR005CYKR005C 1578 nt9.22□□□□□ -0.93
RPL40BP0CH09 GOR1YNL274C 1053 nt9.22□□□□□ -0.93
RPL40BP0CH09 BIO5YNR056C 1686 nt9.22□□□□□ -0.93
RPL40BP0CH09 FIT3YOR383C 615 nt9.21□□□□□ -0.94
RPL40BP0CH09 RIB2YOL066C 1776 nt9.2□□□□□ -0.94
RPL40BP0CH09 LSB3YFR024C-A 1380 nt9.2□□□□□ -0.94
RPL40BP0CH09 SNF1YDR477W 1902 nt9.19□□□□□ -0.94
RPL40BP0CH09 YML089CYML089C 369 nt9.17□□□□□ -0.94
RPL40BP0CH09 PBP1YGR178C 2169 nt9.17□□□□□ -0.94
RPL40BP0CH09 ALD4YOR374W 1560 nt9.16□□□□□ -0.94
RPL40BP0CH09 CYT2YKL087C 675 nt9.16□□□□□ -0.94
RPL40BP0CH09 YCP4YCR004C 744 nt9.15□□□□□ -0.94
RPL40BP0CH09 PAR32YDL173W 888 nt9.15□□□□□ -0.94
RPL40BP0CH09 TIF6YPR016C 738 nt9.15□□□□□ -0.94
RPL40BP0CH09 POM34YLR018C 900 nt9.14□□□□□ -0.95
RPL40BP0CH09 SMM1YNR015W 1155 nt9.14□□□□□ -0.95
RPL40BP0CH09 YGR259CYGR259C 441 nt9.12□□□□□ -0.95
RPL40BP0CH09 YCL074WYCL074W 927 nt9.1□□□□□ -0.95
RPL40BP0CH09 IRC24YIR036C 792 nt9.1□□□□□ -0.95
RPL40BP0CH09 KRE1YNL322C 942 nt9.1□□□□□ -0.95
RPL40BP0CH09 DUS1YML080W 1272 nt9.09□□□□□ -0.95
RPL40BP0CH09 TAF13YML098W 504 nt9.08□□□□□ -0.96
RPL40BP0CH09 MFG1YDL233W 1377 nt9.08□□□□□ -0.96
RPL40BP0CH09 CCT5YJR064W 1689 nt9.07□□□□□ -0.96
RPL40BP0CH09 RPL12BYDR418W 498 nt9.07□□□□□ -0.96
RPL40BP0CH09 NBP35YGL091C 987 nt9.07□□□□□ -0.96
RPL40BP0CH09 AGP1YCL025C 1902 nt9.05□□□□□ -0.96
RPL40BP0CH09 SAM50YNL026W 1455 nt9.05□□□□□ -0.96
RPL40BP0CH09 HXT12YIL170W 1374 nt9.05□□□□□ -0.96
RPL40BP0CH09 CMP2YML057W 1815 nt9.04□□□□□ -0.96
RPL40BP0CH09 YOR268CYOR268C 399 nt9.03□□□□□ -0.96
RPL40BP0CH09 PRO1YDR300C 1287 nt9.02□□□□□ -0.97
RPL40BP0CH09 ATG15YCR068W 1563 nt9.02□□□□□ -0.97
RPL40BP0CH09 LSC2YGR244C 1284 nt9.01□□□□□ -0.97
RPL40BP0CH09 HOG1YLR113W 1308 nt9.01□□□□□ -0.97
RPL40BP0CH09 VRG4YGL225W 1014 nt9□□□□□ -0.97
RPL40BP0CH09 DUT1YBR252W 444 nt9□□□□□ -0.97
RPL40BP0CH09 THI72YOR192C 1800 nt8.99□□□□□ -0.97
RPL40BP0CH09 TUB4YLR212C 1422 nt8.98□□□□□ -0.97
RPL40BP0CH09 YOR343CYOR343C 327 nt8.98□□□□□ -0.97
RPL40BP0CH09 FCY21YER060W 1587 nt8.96□□□□□ -0.97
RPL40BP0CH09 YMR262WYMR262W 942 nt8.96□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms