Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 GUT2YIL155C 1950 nt15.85■□□□□ 0.13
TY2B-LR1P0C2J3 UTH1YKR042W 1098 nt15.84■□□□□ 0.13
TY2B-LR1P0C2J3 YCR102CYCR102C 1107 nt15.83■□□□□ 0.12
TY2B-LR1P0C2J3 GOR1YNL274C 1053 nt15.83■□□□□ 0.12
TY2B-LR1P0C2J3 CLB6YGR109C 1143 nt15.82■□□□□ 0.12
TY2B-LR1P0C2J3 PIB2YGL023C 1908 nt15.81■□□□□ 0.12
TY2B-LR1P0C2J3 CPD1YGR247W 720 nt15.76■□□□□ 0.11
TY2B-LR1P0C2J3 AAC1YMR056C 930 nt15.76■□□□□ 0.11
TY2B-LR1P0C2J3 LOT5YKL183W 921 nt15.75■□□□□ 0.11
TY2B-LR1P0C2J3 ESS1YJR017C 513 nt15.75■□□□□ 0.11
TY2B-LR1P0C2J3 HIP1YGR191W 1812 nt15.74■□□□□ 0.11
TY2B-LR1P0C2J3 TIR3YIL011W 810 nt15.74■□□□□ 0.11
TY2B-LR1P0C2J3 SEN2YLR105C 1134 nt15.72■□□□□ 0.11
TY2B-LR1P0C2J3 PUP1YOR157C 786 nt15.72■□□□□ 0.11
TY2B-LR1P0C2J3 CCA1YER168C 1641 nt15.71■□□□□ 0.11
TY2B-LR1P0C2J3 RAX1YOR301W 1308 nt15.69■□□□□ 0.1
TY2B-LR1P0C2J3 RIB3YDR487C 627 nt15.68■□□□□ 0.1
TY2B-LR1P0C2J3 AQY2YLL052C 450 nt15.64■□□□□ 0.1
TY2B-LR1P0C2J3 ZTA1YBR046C 1005 nt15.63■□□□□ 0.09
TY2B-LR1P0C2J3 YFL054CYFL054C 1941 nt15.62■□□□□ 0.09
TY2B-LR1P0C2J3 NBP35YGL091C 987 nt15.62■□□□□ 0.09
TY2B-LR1P0C2J3 TIF6YPR016C 738 nt15.62■□□□□ 0.09
TY2B-LR1P0C2J3 YEL008WYEL008W 381 nt15.62■□□□□ 0.09
TY2B-LR1P0C2J3 YPI1YFR003C 468 nt15.59■□□□□ 0.09
TY2B-LR1P0C2J3 PTK1YKL198C 1989 nt15.59■□□□□ 0.09
TY2B-LR1P0C2J3 ATG15YCR068W 1563 nt15.57■□□□□ 0.08
TY2B-LR1P0C2J3 YPL222C-AYPL222C-A 246 nt15.56■□□□□ 0.08
TY2B-LR1P0C2J3 POM34YLR018C 900 nt15.55■□□□□ 0.08
TY2B-LR1P0C2J3 APT2YDR441C 546 nt15.52■□□□□ 0.07
TY2B-LR1P0C2J3 RDN18-1RDN18-1 1800 nt15.51■□□□□ 0.07
TY2B-LR1P0C2J3 RDN18-2RDN18-2 1800 nt15.51■□□□□ 0.07
TY2B-LR1P0C2J3 PRO1YDR300C 1287 nt15.48■□□□□ 0.07
TY2B-LR1P0C2J3 RIB2YOL066C 1776 nt15.47■□□□□ 0.07
TY2B-LR1P0C2J3 GND1YHR183W 1470 nt15.47■□□□□ 0.07
TY2B-LR1P0C2J3 NAP1YKR048C 1254 nt15.44■□□□□ 0.06
TY2B-LR1P0C2J3 PGC1YPL206C 966 nt15.44■□□□□ 0.06
TY2B-LR1P0C2J3 MET28YIR017C 564 nt15.43■□□□□ 0.06
TY2B-LR1P0C2J3 AKR2YOR034C 2250 nt15.42■□□□□ 0.06
TY2B-LR1P0C2J3 PAU5YFL020C 369 nt15.41■□□□□ 0.06
TY2B-LR1P0C2J3 DUS1YML080W 1272 nt15.39■□□□□ 0.05
TY2B-LR1P0C2J3 SWE1YJL187C 2460 nt15.37■□□□□ 0.05
TY2B-LR1P0C2J3 LSB3YFR024C-A 1380 nt15.37■□□□□ 0.05
TY2B-LR1P0C2J3 YJR114WYJR114W 393 nt15.36■□□□□ 0.05
TY2B-LR1P0C2J3 YML089CYML089C 369 nt15.36■□□□□ 0.05
TY2B-LR1P0C2J3 ALD4YOR374W 1560 nt15.32■□□□□ 0.04
TY2B-LR1P0C2J3 YJL055WYJL055W 738 nt15.31■□□□□ 0.04
TY2B-LR1P0C2J3 SMM1YNR015W 1155 nt15.31■□□□□ 0.04
TY2B-LR1P0C2J3 FIT3YOR383C 615 nt15.31■□□□□ 0.04
TY2B-LR1P0C2J3 YJL064WYJL064W 396 nt15.3■□□□□ 0.04
TY2B-LR1P0C2J3 SLG1YOR008C 1137 nt15.3■□□□□ 0.04
TY2B-LR1P0C2J3 UGA4YDL210W 1716 nt15.27■□□□□ 0.04
TY2B-LR1P0C2J3 LSC2YGR244C 1284 nt15.27■□□□□ 0.04
TY2B-LR1P0C2J3 YBR232CYBR232C 360 nt15.27■□□□□ 0.04
TY2B-LR1P0C2J3 STR3YGL184C 1398 nt15.25■□□□□ 0.03
TY2B-LR1P0C2J3 PRY1YJL079C 900 nt15.24■□□□□ 0.03
TY2B-LR1P0C2J3 PAU19YMR325W 375 nt15.24■□□□□ 0.03
TY2B-LR1P0C2J3 DIF1YLR437C 402 nt15.21■□□□□ 0.03
TY2B-LR1P0C2J3 TIP1YBR067C 633 nt15.2■□□□□ 0.02
TY2B-LR1P0C2J3 GAP1YKR039W 1809 nt15.15■□□□□ 0.02
TY2B-LR1P0C2J3 YCL074WYCL074W 927 nt15.14■□□□□ 0.01
TY2B-LR1P0C2J3 YAR028WYAR028W 705 nt15.13■□□□□ 0.01
TY2B-LR1P0C2J3 ARP6YLR085C 1317 nt15.11■□□□□ 0.01
TY2B-LR1P0C2J3 FCY21YER060W 1587 nt15.1■□□□□ 0.01
TY2B-LR1P0C2J3 HXT12YIL170W 1374 nt15.09■□□□□ 0.01
TY2B-LR1P0C2J3 THI72YOR192C 1800 nt15.07■□□□□ 0
TY2B-LR1P0C2J3 VRG4YGL225W 1014 nt15.05■□□□□ -0
TY2B-LR1P0C2J3 PLB1YMR008C 1995 nt15.05■□□□□ -0
TY2B-LR1P0C2J3 MTG2YHR168W 1557 nt15.03■□□□□ -0
TY2B-LR1P0C2J3 ERG6YML008C 1152 nt15.03■□□□□ -0
TY2B-LR1P0C2J3 RTN2YDL204W 1182 nt15.02□□□□□ -0.01
TY2B-LR1P0C2J3 TIM44YIL022W 1296 nt15.01□□□□□ -0.01
TY2B-LR1P0C2J3 CCT5YJR064W 1689 nt15□□□□□ -0.01
TY2B-LR1P0C2J3 HSP60YLR259C 1719 nt14.99□□□□□ -0.01
TY2B-LR1P0C2J3 UTR1YJR049C 1593 nt14.97□□□□□ -0.01
TY2B-LR1P0C2J3 ALP1YNL270C 1722 nt14.96□□□□□ -0.02
TY2B-LR1P0C2J3 YJL118WYJL118W 660 nt14.93□□□□□ -0.02
TY2B-LR1P0C2J3 STP3YLR375W 1032 nt14.9□□□□□ -0.02
TY2B-LR1P0C2J3 MEP3YPR138C 1470 nt14.9□□□□□ -0.02
TY2B-LR1P0C2J3 SNZ1YMR096W 894 nt14.85□□□□□ -0.03
TY2B-LR1P0C2J3 YER190C-AYER190C-A 576 nt14.84□□□□□ -0.03
TY2B-LR1P0C2J3 YGR296C-AYGR296C-A 576 nt14.84□□□□□ -0.03
TY2B-LR1P0C2J3 YML133W-AYML133W-A 576 nt14.84□□□□□ -0.03
TY2B-LR1P0C2J3 YNL339W-AYNL339W-A 576 nt14.84□□□□□ -0.03
TY2B-LR1P0C2J3 YPL283W-AYPL283W-A 576 nt14.84□□□□□ -0.03
TY2B-LR1P0C2J3 SED1YDR077W 1017 nt14.82□□□□□ -0.04
TY2B-LR1P0C2J3 POP2YNR052C 1302 nt14.81□□□□□ -0.04
TY2B-LR1P0C2J3 PRM5YIL117C 957 nt14.79□□□□□ -0.04
TY2B-LR1P0C2J3 RIB1YBL033C 1038 nt14.79□□□□□ -0.04
TY2B-LR1P0C2J3 GAL3YDR009W 1563 nt14.77□□□□□ -0.05
TY2B-LR1P0C2J3 YMR262WYMR262W 942 nt14.75□□□□□ -0.05
TY2B-LR1P0C2J3 YPL251WYPL251W 303 nt14.75□□□□□ -0.05
TY2B-LR1P0C2J3 APS2YJR058C 444 nt14.75□□□□□ -0.05
TY2B-LR1P0C2J3 LSB5YCL034W 1065 nt14.73□□□□□ -0.05
TY2B-LR1P0C2J3 FUR4YBR021W 1902 nt14.72□□□□□ -0.05
TY2B-LR1P0C2J3 SOD2YHR008C 702 nt14.72□□□□□ -0.05
TY2B-LR1P0C2J3 YER152W-AYER152W-A 567 nt14.71□□□□□ -0.05
TY2B-LR1P0C2J3 TAF13YML098W 504 nt14.7□□□□□ -0.06
TY2B-LR1P0C2J3 CSM1YCR086W 573 nt14.67□□□□□ -0.06
TY2B-LR1P0C2J3 SAM3YPL274W 1764 nt14.65□□□□□ -0.06
TY2B-LR1P0C2J3 QDR2YIL121W 1629 nt14.65□□□□□ -0.06
Retrieved 100 of 7,029 protein–RNA pairs in 81.9 ms