Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC133041.1-202ENST00000642053 222 ntBASIC30.6■■■□□ 2.49
XRN1Q8IZH2 AL353803.4-201ENST00000565882 1934 ntBASIC30.6■■■□□ 2.49
XRN1Q8IZH2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC30.6■■■□□ 2.49
XRN1Q8IZH2 AC055733.4-201ENST00000638462 1354 ntBASIC30.6■■■□□ 2.49
XRN1Q8IZH2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.59■■■□□ 2.49
XRN1Q8IZH2 AC098590.1-201ENST00000468126 897 ntBASIC30.59■■■□□ 2.49
XRN1Q8IZH2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
XRN1Q8IZH2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
XRN1Q8IZH2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
XRN1Q8IZH2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC30.59■■■□□ 2.49
XRN1Q8IZH2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
XRN1Q8IZH2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC30.58■■■□□ 2.49
XRN1Q8IZH2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
XRN1Q8IZH2 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.57■■■□□ 2.48
XRN1Q8IZH2 FAM201B-201ENST00000458407 597 ntBASIC30.57■■■□□ 2.48
XRN1Q8IZH2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.57■■■□□ 2.48
XRN1Q8IZH2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
XRN1Q8IZH2 AC138907.5-202ENST00000569484 235 ntBASIC30.56■■■□□ 2.48
XRN1Q8IZH2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC30.56■■■□□ 2.48
XRN1Q8IZH2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
XRN1Q8IZH2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.56■■■□□ 2.48
XRN1Q8IZH2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
XRN1Q8IZH2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
XRN1Q8IZH2 AC105036.2-201ENST00000569468 176 ntBASIC30.56■■■□□ 2.48
XRN1Q8IZH2 AC013268.1-206ENST00000638368 961 ntBASIC30.56■■■□□ 2.48
XRN1Q8IZH2 AC112229.1-201ENST00000639295 961 ntBASIC30.56■■■□□ 2.48
XRN1Q8IZH2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
XRN1Q8IZH2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
XRN1Q8IZH2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.55■■■□□ 2.48
XRN1Q8IZH2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
XRN1Q8IZH2 DUSP8P5-201ENST00000422884 1815 ntBASIC30.54■■■□□ 2.48
XRN1Q8IZH2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.54■■■□□ 2.48
XRN1Q8IZH2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC30.54■■■□□ 2.48
XRN1Q8IZH2 KRT18P20-201ENST00000548986 1279 ntBASIC30.54■■■□□ 2.48
XRN1Q8IZH2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC30.54■■■□□ 2.48
XRN1Q8IZH2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
XRN1Q8IZH2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 SLC7A5P1-201ENST00000568957 537 ntBASIC30.53■■■□□ 2.48
XRN1Q8IZH2 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 PRORSD1P-201ENST00000295112 541 ntBASIC30.53■■■□□ 2.48
XRN1Q8IZH2 AC007322.4-201ENST00000509611 723 ntBASIC30.53■■■□□ 2.48
XRN1Q8IZH2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC30.53■■■□□ 2.48
XRN1Q8IZH2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
XRN1Q8IZH2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
XRN1Q8IZH2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
XRN1Q8IZH2 RPS2P52-201ENST00000469610 820 ntBASIC30.52■■■□□ 2.48
XRN1Q8IZH2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.52■■■□□ 2.48
XRN1Q8IZH2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.51■■■□□ 2.47
XRN1Q8IZH2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
XRN1Q8IZH2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 AC083880.1-201ENST00000608266 535 ntBASIC30.5■■■□□ 2.47
XRN1Q8IZH2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.5■■■□□ 2.47
XRN1Q8IZH2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 RNA5SP413-201ENST00000516373 109 ntBASIC30.49■■■□□ 2.47
XRN1Q8IZH2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
XRN1Q8IZH2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 RARRES2P4-201ENST00000514074 484 ntBASIC30.48■■■□□ 2.47
XRN1Q8IZH2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
XRN1Q8IZH2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC30.47■■■□□ 2.47
XRN1Q8IZH2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
XRN1Q8IZH2 AC068338.2-201ENST00000563278 1430 ntBASIC30.47■■■□□ 2.47
XRN1Q8IZH2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
XRN1Q8IZH2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
XRN1Q8IZH2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC30.46■■■□□ 2.47
XRN1Q8IZH2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
XRN1Q8IZH2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC30.45■■■□□ 2.47
XRN1Q8IZH2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.45■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms