Protein–RNA interactions for Protein: Q04437

YKU80, ATP-dependent DNA helicase II subunit 2, yeastyeast

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YKU80Q04437 YER145C-AYER145C-A 438 nt4.16□□□□□ -1.74
YKU80Q04437 YGL177WYGL177W 348 nt4.16□□□□□ -1.74
YKU80Q04437 GVP36YIL041W 981 nt4.16□□□□□ -1.74
YKU80Q04437 SDS3YIL084C 984 nt4.16□□□□□ -1.74
YKU80Q04437 RPL14AYKL006W 417 nt4.16□□□□□ -1.74
YKU80Q04437 YLR444CYLR444C 303 nt4.16□□□□□ -1.74
YKU80Q04437 RPL18BYNL301C 561 nt4.16□□□□□ -1.74
YKU80Q04437 RPL18AYOL120C 561 nt4.16□□□□□ -1.74
YKU80Q04437 TAF3YPL011C 1062 nt4.16□□□□□ -1.74
YKU80Q04437 ATG5YPL149W 885 nt4.16□□□□□ -1.74
YKU80Q04437 YBR242WYBR242W 717 nt4.16□□□□□ -1.74
YKU80Q04437 MLH2YLR035C 2088 nt4.16□□□□□ -1.74
YKU80Q04437 FMP25YLR077W 1752 nt4.16□□□□□ -1.74
YKU80Q04437 ACA1YER045C 1470 nt4.16□□□□□ -1.74
YKU80Q04437 DSN1YIR010W 1731 nt4.15□□□□□ -1.74
YKU80Q04437 NHP10YDL002C 612 nt4.15□□□□□ -1.75
YKU80Q04437 YDL094CYDL094C 510 nt4.15□□□□□ -1.75
YKU80Q04437 YFR032C-BYFR032C-B 264 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)CtQ(UUG)C 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)D1tQ(UUG)D1 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)D2tQ(UUG)D2 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)D3tQ(UUG)D3 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)E1tQ(UUG)E1 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)HtQ(UUG)H 72 nt4.15□□□□□ -1.75
YKU80Q04437 tQ(UUG)LtQ(UUG)L 72 nt4.15□□□□□ -1.75
YKU80Q04437 tX(XXX)DtX(XXX)D 100 nt4.15□□□□□ -1.75
YKU80Q04437 RSM26YJR101W 801 nt4.15□□□□□ -1.75
YKU80Q04437 IRC25YLR021W 540 nt4.15□□□□□ -1.75
YKU80Q04437 YMR010WYMR010W 1218 nt4.15□□□□□ -1.75
YKU80Q04437 SUI1YNL244C 327 nt4.15□□□□□ -1.75
YKU80Q04437 YRM1YOR172W 2361 nt4.15□□□□□ -1.75
YKU80Q04437 BRE4YDL231C 3378 nt4.15□□□□□ -1.75
YKU80Q04437 GRS2YPR081C 1857 nt4.15□□□□□ -1.75
YKU80Q04437 BIK1YCL029C 1323 nt4.15□□□□□ -1.75
YKU80Q04437 ZDS1YMR273C 2748 nt4.15□□□□□ -1.75
YKU80Q04437 PGS1YCL004W 1566 nt4.14□□□□□ -1.75
YKU80Q04437 KIP3YGL216W 2418 nt4.14□□□□□ -1.75
YKU80Q04437 CIT1YNR001C 1440 nt4.14□□□□□ -1.75
YKU80Q04437 ULP1YPL020C 1866 nt4.14□□□□□ -1.75
YKU80Q04437 GRX3YDR098C 858 nt4.14□□□□□ -1.75
YKU80Q04437 PLP1YDR183W 693 nt4.14□□□□□ -1.75
YKU80Q04437 ALB1YJL122W 528 nt4.14□□□□□ -1.75
YKU80Q04437 ATG34YOL083W 1239 nt4.14□□□□□ -1.75
YKU80Q04437 YOR263CYOR263C 408 nt4.14□□□□□ -1.75
YKU80Q04437 YBR096WYBR096W 693 nt4.14□□□□□ -1.75
YKU80Q04437 YIL001WYIL001W 1542 nt4.13□□□□□ -1.75
YKU80Q04437 KRE5YOR336W 4098 nt4.13□□□□□ -1.75
YKU80Q04437 MRPL49YJL096W 486 nt4.13□□□□□ -1.75
YKU80Q04437 YLR407WYLR407W 687 nt4.13□□□□□ -1.75
YKU80Q04437 ARG80YMR042W 534 nt4.13□□□□□ -1.75
YKU80Q04437 RER1YCL001W 567 nt4.13□□□□□ -1.75
YKU80Q04437 DAP2YHR028C 2457 nt4.13□□□□□ -1.75
YKU80Q04437 MDM10YAL010C 1482 nt4.12□□□□□ -1.75
YKU80Q04437 CTM1YHR109W 1758 nt4.12□□□□□ -1.75
YKU80Q04437 PEP7YDR323C 1548 nt4.12□□□□□ -1.75
YKU80Q04437 CUE3YGL110C 1875 nt4.12□□□□□ -1.75
YKU80Q04437 ABP140YOR239W 1887 nt4.12□□□□□ -1.75
YKU80Q04437 PLM2YDR501W 1566 nt4.12□□□□□ -1.75
YKU80Q04437 RPL24AYGL031C 468 nt4.12□□□□□ -1.75
YKU80Q04437 tR(UCU)Q1tR(UCU)Q1 73 nt4.12□□□□□ -1.75
YKU80Q04437 YIL171WYIL171W 330 nt4.12□□□□□ -1.75
YKU80Q04437 RPF2YKR081C 1035 nt4.12□□□□□ -1.75
YKU80Q04437 YNL035CYNL035C 1170 nt4.12□□□□□ -1.75
YKU80Q04437 CPR8YNR028W 927 nt4.12□□□□□ -1.75
YKU80Q04437 UTP23YOR004W 765 nt4.12□□□□□ -1.75
YKU80Q04437 CAF20YOR276W 486 nt4.12□□□□□ -1.75
YKU80Q04437 SWI1YPL016W 3945 nt4.12□□□□□ -1.75
YKU80Q04437 VID27YNL212W 2349 nt4.11□□□□□ -1.75
YKU80Q04437 YCR075W-AYCR075W-A 228 nt4.11□□□□□ -1.75
YKU80Q04437 PRP11YDL043C 801 nt4.11□□□□□ -1.75
YKU80Q04437 RXT3YDL076C 885 nt4.11□□□□□ -1.75
YKU80Q04437 YDR355CYDR355C 303 nt4.11□□□□□ -1.75
YKU80Q04437 BMH1YER177W 804 nt4.11□□□□□ -1.75
YKU80Q04437 YGL138CYGL138C 1038 nt4.11□□□□□ -1.75
YKU80Q04437 YKL162CYKL162C 1209 nt4.11□□□□□ -1.75
YKU80Q04437 YLR163W-AYLR163W-A 114 nt4.11□□□□□ -1.75
YKU80Q04437 YML094C-AYML094C-A 402 nt4.11□□□□□ -1.75
YKU80Q04437 SIW14YNL032W 846 nt4.11□□□□□ -1.75
YKU80Q04437 NIS1YNL078W 1224 nt4.11□□□□□ -1.75
YKU80Q04437 SYC1YOR179C 567 nt4.11□□□□□ -1.75
YKU80Q04437 MRPL51YPR100W 423 nt4.11□□□□□ -1.75
YKU80Q04437 GDT1YBR187W 843 nt4.11□□□□□ -1.75
YKU80Q04437 RRP7YCL031C 894 nt4.11□□□□□ -1.75
YKU80Q04437 FUN12YAL035W 3009 nt4.11□□□□□ -1.75
YKU80Q04437 KRE29YER038C 1395 nt4.11□□□□□ -1.75
YKU80Q04437 CAF130YGR134W 3369 nt4.11□□□□□ -1.75
YKU80Q04437 APL4YPR029C 2499 nt4.11□□□□□ -1.75
YKU80Q04437 SEC59YMR013C 1560 nt4.1□□□□□ -1.75
YKU80Q04437 CET1YPL228W 1650 nt4.1□□□□□ -1.75
YKU80Q04437 YEL053W-AYEL053W-A 348 nt4.1□□□□□ -1.75
YKU80Q04437 SPR6YER115C 576 nt4.1□□□□□ -1.75
YKU80Q04437 YGR270C-AYGR270C-A 219 nt4.1□□□□□ -1.75
YKU80Q04437 YIL171W-AYIL171W-A 453 nt4.1□□□□□ -1.75
YKU80Q04437 PET130YJL023C 1044 nt4.1□□□□□ -1.75
YKU80Q04437 YJL220WYJL220W 453 nt4.1□□□□□ -1.75
YKU80Q04437 AHP1YLR109W 531 nt4.1□□□□□ -1.75
YKU80Q04437 NCR1YPL006W 3513 nt4.1□□□□□ -1.75
YKU80Q04437 SWH1YAR042W 3567 nt4.1□□□□□ -1.75
YKU80Q04437 GIC2YDR309C 1152 nt4.09□□□□□ -1.75
YKU80Q04437 SPT15YER148W 723 nt4.09□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 47.4 ms