Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 PXK-203ENST00000383715 1756 ntTSL 5 BASIC33.41■■■□□ 2.94
CDC42BPAQ5VT25 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 USP45-205ENST00000472914 1617 ntTSL 5 BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CDC42BPAQ5VT25 MFF-207ENST00000409565 1548 ntTSL 2 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC33.39■■■□□ 2.94
CDC42BPAQ5VT25 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.93
CDC42BPAQ5VT25 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC33.38■■■□□ 2.93
CDC42BPAQ5VT25 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
CDC42BPAQ5VT25 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC33.38■■■□□ 2.93
CDC42BPAQ5VT25 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC33.38■■■□□ 2.93
CDC42BPAQ5VT25 GPX1P1-201ENST00000388829 606 ntBASIC33.37■■■□□ 2.93
CDC42BPAQ5VT25 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC33.37■■■□□ 2.93
CDC42BPAQ5VT25 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC33.37■■■□□ 2.93
CDC42BPAQ5VT25 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC33.37■■■□□ 2.93
CDC42BPAQ5VT25 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
CDC42BPAQ5VT25 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 AC231657.2-201ENST00000624556 255 ntBASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 PREB-202ENST00000406567 1910 ntTSL 5 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 PARP1-202ENST00000366792 553 ntTSL 3 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC33.36■■■□□ 2.93
CDC42BPAQ5VT25 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 AC009237.3-201ENST00000393279 1427 ntBASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 TFG-210ENST00000620299 1289 ntTSL 5 BASIC33.35■■■□□ 2.93
CDC42BPAQ5VT25 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CDC42BPAQ5VT25 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CDC42BPAQ5VT25 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC33.34■■■□□ 2.93
CDC42BPAQ5VT25 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CDC42BPAQ5VT25 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC33.34■■■□□ 2.93
CDC42BPAQ5VT25 OAS3-207ENST00000551007 998 ntTSL 2 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 DUSP8P5-201ENST00000422884 1815 ntBASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC33.33■■■□□ 2.93
CDC42BPAQ5VT25 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC33.32■■■□□ 2.93
CDC42BPAQ5VT25 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
CDC42BPAQ5VT25 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 TSPY6P-201ENST00000448518 926 ntBASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 AL121832.2-201ENST00000610979 668 ntBASIC33.31■■■□□ 2.92
CDC42BPAQ5VT25 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
CDC42BPAQ5VT25 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms