Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 AP001160.3-201ENST00000601484 763 ntBASIC31.06■■■□□ 2.56
LTBP4Q8N2S1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC31.05■■■□□ 2.56
LTBP4Q8N2S1 AC010501.1-201ENST00000606270 1962 ntBASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 AP003097.1-201ENST00000530657 1135 ntBASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 AL445228.2-201ENST00000605589 952 ntBASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LTBP4Q8N2S1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 OR10C1-204ENST00000622521 1039 ntBASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LTBP4Q8N2S1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 AC005224.4-201ENST00000583262 1652 ntBASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC31.02■■■□□ 2.56
LTBP4Q8N2S1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
LTBP4Q8N2S1 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 SNORA78-201ENST00000459373 127 ntBASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 AC091874.3-201ENST00000512672 1195 ntBASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.01■■■□□ 2.55
LTBP4Q8N2S1 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC31■■■□□ 2.55
LTBP4Q8N2S1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC31■■■□□ 2.55
LTBP4Q8N2S1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 BX276092.2-201ENST00000417668 665 ntBASIC31■■■□□ 2.55
LTBP4Q8N2S1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 AC097658.1-201ENST00000475555 843 ntBASIC31■■■□□ 2.55
LTBP4Q8N2S1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31■■■□□ 2.55
LTBP4Q8N2S1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 AC007322.4-201ENST00000509611 723 ntBASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.99■■■□□ 2.55
LTBP4Q8N2S1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 AC016405.3-201ENST00000607710 860 ntBASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.98■■■□□ 2.55
LTBP4Q8N2S1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 AL512625.2-201ENST00000417533 625 ntBASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC30.97■■■□□ 2.55
LTBP4Q8N2S1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms