Protein–RNA interactions for Protein: P43588

RPN11, Ubiquitin carboxyl-terminal hydrolase RPN11, yeastyeast

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN11P43588 TGS1YPL157W 948 nt4.53□□□□□ -1.68
RPN11P43588 ATG29YPL166W 642 nt4.53□□□□□ -1.68
RPN11P43588 SHE3YBR130C 1278 nt4.53□□□□□ -1.68
RPN11P43588 KRS1YDR037W 1776 nt4.53□□□□□ -1.69
RPN11P43588 TUP1YCR084C 2142 nt4.52□□□□□ -1.69
RPN11P43588 FAS2YPL231W 5664 nt4.52□□□□□ -1.69
RPN11P43588 HPC2YBR215W 1878 nt4.52□□□□□ -1.69
RPN11P43588 YHR180WYHR180W 492 nt4.52□□□□□ -1.69
RPN11P43588 COA4YLR218C 453 nt4.52□□□□□ -1.69
RPN11P43588 RUF20RUF20 443 nt4.52□□□□□ -1.69
RPN11P43588 MDJ2YNL328C 441 nt4.52□□□□□ -1.69
RPN11P43588 MDY2YOL111C 639 nt4.52□□□□□ -1.69
RPN11P43588 YOR314WYOR314W 330 nt4.52□□□□□ -1.69
RPN11P43588 TEL1YBL088C 8364 nt4.52□□□□□ -1.69
RPN11P43588 VAC8YEL013W 1737 nt4.52□□□□□ -1.69
RPN11P43588 RNH202YDR279W 1053 nt4.51□□□□□ -1.69
RPN11P43588 NKP1YDR383C 717 nt4.51□□□□□ -1.69
RPN11P43588 YIL163CYIL163C 354 nt4.51□□□□□ -1.69
RPN11P43588 RPF2YKR081C 1035 nt4.51□□□□□ -1.69
RPN11P43588 NEJ1YLR265C 1029 nt4.51□□□□□ -1.69
RPN11P43588 ELO3YLR372W 1038 nt4.51□□□□□ -1.69
RPN11P43588 CUS2YNL286W 858 nt4.51□□□□□ -1.69
RPN11P43588 VPS21YOR089C 633 nt4.51□□□□□ -1.69
RPN11P43588 IAH1YOR126C 717 nt4.51□□□□□ -1.69
RPN11P43588 NPL4YBR170C 1743 nt4.51□□□□□ -1.69
RPN11P43588 CYK3YDL117W 2658 nt4.5□□□□□ -1.69
RPN11P43588 DSF2YBR007C 2211 nt4.5□□□□□ -1.69
RPN11P43588 EMP47YFL048C 1338 nt4.5□□□□□ -1.69
RPN11P43588 YCR015CYCR015C 954 nt4.5□□□□□ -1.69
RPN11P43588 YCR099CYCR099C 468 nt4.5□□□□□ -1.69
RPN11P43588 YER076CYER076C 909 nt4.5□□□□□ -1.69
RPN11P43588 ALB1YJL122W 528 nt4.5□□□□□ -1.69
RPN11P43588 YLR169WYLR169W 354 nt4.5□□□□□ -1.69
RPN11P43588 PNT1YOR266W 1272 nt4.5□□□□□ -1.69
RPN11P43588 PRM7YDL039C 2097 nt4.5□□□□□ -1.69
RPN11P43588 RDS1YCR106W 2499 nt4.5□□□□□ -1.69
RPN11P43588 TGL4YKR089C 2733 nt4.5□□□□□ -1.69
RPN11P43588 ALR2YFL050C 2577 nt4.5□□□□□ -1.69
RPN11P43588 CYM1YDR430C 2970 nt4.5□□□□□ -1.69
RPN11P43588 YNL095CYNL095C 1929 nt4.49□□□□□ -1.69
RPN11P43588 MSS2YDL107W 1056 nt4.49□□□□□ -1.69
RPN11P43588 YGR149WYGR149W 1299 nt4.49□□□□□ -1.69
RPN11P43588 SOL4YGR248W 768 nt4.49□□□□□ -1.69
RPN11P43588 PPX1YHR201C 1194 nt4.49□□□□□ -1.69
RPN11P43588 AIM23YJL131C 1071 nt4.49□□□□□ -1.69
RPN11P43588 RPS1BYML063W 768 nt4.49□□□□□ -1.69
RPN11P43588 MBP1YDL056W 2502 nt4.49□□□□□ -1.69
RPN11P43588 MDM10YAL010C 1482 nt4.49□□□□□ -1.69
RPN11P43588 RRP14YKL082C 1305 nt4.48□□□□□ -1.69
RPN11P43588 TFC7YOR110W 1308 nt4.48□□□□□ -1.69
RPN11P43588 YBR139WYBR139W 1527 nt4.48□□□□□ -1.69
RPN11P43588 SLA1YBL007C 3735 nt4.48□□□□□ -1.69
RPN11P43588 ACT1YFL039C 1128 nt4.48□□□□□ -1.69
RPN11P43588 COX3Q0275 810 nt4.48□□□□□ -1.69
RPN11P43588 DCG1YIR030C 735 nt4.48□□□□□ -1.69
RPN11P43588 YAL069WYAL069W 315 nt4.48□□□□□ -1.69
RPN11P43588 YMR316C-AYMR316C-A 312 nt4.48□□□□□ -1.69
RPN11P43588 YPL114WYPL114W 420 nt4.48□□□□□ -1.69
RPN11P43588 SET6YPL165C 1122 nt4.48□□□□□ -1.69
RPN11P43588 RTG3YBL103C 1461 nt4.48□□□□□ -1.69
RPN11P43588 HOYDL227C 1761 nt4.48□□□□□ -1.69
RPN11P43588 MCM7YBR202W 2538 nt4.47□□□□□ -1.69
RPN11P43588 CDC45YLR103C 1953 nt4.47□□□□□ -1.69
RPN11P43588 SHQ1YIL104C 1524 nt4.47□□□□□ -1.69
RPN11P43588 YGL218WYGL218W 651 nt4.47□□□□□ -1.69
RPN11P43588 HOT13YKL084W 351 nt4.47□□□□□ -1.69
RPN11P43588 MTD1YKR080W 963 nt4.47□□□□□ -1.69
RPN11P43588 YLR042CYLR042C 486 nt4.47□□□□□ -1.69
RPN11P43588 SHE1YBL031W 1017 nt4.47□□□□□ -1.69
RPN11P43588 MRM1YOR201C 1239 nt4.47□□□□□ -1.69
RPN11P43588 YOR387CYOR387C 621 nt4.47□□□□□ -1.69
RPN11P43588 NOC4YPR144C 1659 nt4.47□□□□□ -1.69
RPN11P43588 YPP1YGR198W 2454 nt4.47□□□□□ -1.69
RPN11P43588 RTT109YLL002W 1311 nt4.46□□□□□ -1.69
RPN11P43588 UBA2YDR390C 1911 nt4.46□□□□□ -1.69
RPN11P43588 SEC9YGR009C 1956 nt4.46□□□□□ -1.7
RPN11P43588 SHR3YDL212W 633 nt4.46□□□□□ -1.7
RPN11P43588 AIM6YDL237W 1173 nt4.46□□□□□ -1.7
RPN11P43588 DAS2YDR020C 699 nt4.46□□□□□ -1.7
RPN11P43588 CAX4YGR036C 720 nt4.46□□□□□ -1.7
RPN11P43588 VMA22YHR060W 546 nt4.46□□□□□ -1.7
RPN11P43588 YAL016C-BYAL016C-B 186 nt4.46□□□□□ -1.7
RPN11P43588 YKL177WYKL177W 339 nt4.46□□□□□ -1.7
RPN11P43588 YLR363W-AYLR363W-A 258 nt4.46□□□□□ -1.7
RPN11P43588 YPR142CYPR142C 564 nt4.46□□□□□ -1.7
RPN11P43588 GRX1YCL035C 333 nt4.46□□□□□ -1.7
RPN11P43588 ECM32YER176W 3366 nt4.45□□□□□ -1.7
RPN11P43588 ACE2YLR131C 2313 nt4.45□□□□□ -1.7
RPN11P43588 PRP9YDL030W 1593 nt4.45□□□□□ -1.7
RPN11P43588 RNR1YER070W 2667 nt4.45□□□□□ -1.7
RPN11P43588 TEC1YBR083W 1461 nt4.45□□□□□ -1.7
RPN11P43588 YCR024C-BYCR024C-B 267 nt4.45□□□□□ -1.7
RPN11P43588 CNL1YDR357C 369 nt4.45□□□□□ -1.7
RPN11P43588 YER067C-AYER067C-A 324 nt4.45□□□□□ -1.7
RPN11P43588 YER133W-AYER133W-A 342 nt4.45□□□□□ -1.7
RPN11P43588 ARG3YJL088W 1017 nt4.45□□□□□ -1.7
RPN11P43588 YMR122W-AYMR122W-A 255 nt4.45□□□□□ -1.7
RPN11P43588 MRP21YBL090W 534 nt4.45□□□□□ -1.7
RPN11P43588 TRM1YDR120C 1713 nt4.45□□□□□ -1.7
RPN11P43588 RFT1YBL020W 1725 nt4.44□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms