Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 AC027612.3-201ENST00000413684 1047 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 AL354811.1-201ENST00000610286 706 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 MIR6821-201ENST00000617625 74 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 AC087239.1-201ENST00000622671 572 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.3■■□□□ 1.32
LIMS2Q7Z4I7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 AC097381.1-201ENST00000429019 1296 ntBASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.29■■□□□ 1.32
LIMS2Q7Z4I7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 SMUG1P1-201ENST00000590640 811 ntBASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
LIMS2Q7Z4I7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 AC105233.4-201ENST00000642045 216 ntBASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.27■■□□□ 1.32
LIMS2Q7Z4I7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 SP2-202ENST00000613139 908 ntTSL 5 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LIMS2Q7Z4I7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LIMS2Q7Z4I7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LIMS2Q7Z4I7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 AC123595.1-201ENST00000440769 1046 ntBASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 YBX1P1-201ENST00000445822 960 ntBASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 AC079089.2-201ENST00000531211 1277 ntBASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 MIR6084-201ENST00000622012 110 ntBASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LIMS2Q7Z4I7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 AC087623.3-201ENST00000607047 1098 ntBASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.22■■□□□ 1.31
LIMS2Q7Z4I7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms