Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.24■□□□□ 0.99
SNAP47Q5SQN1 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 AP005435.1-201ENST00000529293 1178 ntBASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SNAP47Q5SQN1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 AC027612.3-201ENST00000413684 1047 ntBASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SNAP47Q5SQN1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 AC105233.4-201ENST00000642045 216 ntBASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SNAP47Q5SQN1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SNAP47Q5SQN1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L2-201ENST00000561772 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L6-201ENST00000626483 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L1-201ENST00000627662 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L8-201ENST00000629013 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L3-201ENST00000630187 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L7-201ENST00000630678 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 DUX4L5-201ENST00000630834 1275 ntBASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SNAP47Q5SQN1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 KRT18P5-201ENST00000436075 1291 ntBASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SNAP47Q5SQN1 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 AC123595.1-201ENST00000440769 1046 ntBASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SNAP47Q5SQN1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms