Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.12■□□□□ 0.97
LINGO3P0C6S8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINGO3P0C6S8 C11orf96-202ENST00000528572 1834 ntBASIC21.11■□□□□ 0.97
LINGO3P0C6S8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 AC092068.2-201ENST00000590491 1708 ntBASIC21.1■□□□□ 0.97
LINGO3P0C6S8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINGO3P0C6S8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LINGO3P0C6S8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.08■□□□□ 0.97
LINGO3P0C6S8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINGO3P0C6S8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINGO3P0C6S8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.08■□□□□ 0.96
LINGO3P0C6S8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LINGO3P0C6S8 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.07■□□□□ 0.96
LINGO3P0C6S8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 AL451085.2-201ENST00000605085 799 ntBASIC21.06■□□□□ 0.96
LINGO3P0C6S8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINGO3P0C6S8 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
LINGO3P0C6S8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 AL157384.1-201ENST00000445995 2473 ntBASIC21.05■□□□□ 0.96
LINGO3P0C6S8 AL161729.1-201ENST00000604104 1402 ntBASIC21.05■□□□□ 0.96
LINGO3P0C6S8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINGO3P0C6S8 AC005229.4-201ENST00000610085 2198 ntBASIC21.05■□□□□ 0.96
LINGO3P0C6S8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms