Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.99■□□□□ 0.95
VCX3BQ9H321 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
VCX3BQ9H321 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
VCX3BQ9H321 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VCX3BQ9H321 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.98■□□□□ 0.95
VCX3BQ9H321 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
VCX3BQ9H321 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
VCX3BQ9H321 DUX4L29-201ENST00000425409 679 ntBASIC20.98■□□□□ 0.95
VCX3BQ9H321 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCX3BQ9H321 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCX3BQ9H321 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCX3BQ9H321 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
VCX3BQ9H321 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VCX3BQ9H321 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 AC005229.4-201ENST00000610085 2198 ntBASIC20.97■□□□□ 0.95
VCX3BQ9H321 AL391422.3-201ENST00000603791 2761 ntBASIC20.97■□□□□ 0.95
VCX3BQ9H321 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
VCX3BQ9H321 AC044849.2-201ENST00000606596 710 ntBASIC20.97■□□□□ 0.95
VCX3BQ9H321 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCX3BQ9H321 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.96■□□□□ 0.95
VCX3BQ9H321 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VCX3BQ9H321 KRT18P10-201ENST00000388836 1287 ntBASIC20.96■□□□□ 0.95
VCX3BQ9H321 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
VCX3BQ9H321 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 LINC01521-201ENST00000504184 1943 ntBASIC20.96■□□□□ 0.95
VCX3BQ9H321 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCX3BQ9H321 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VCX3BQ9H321 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.95■□□□□ 0.94
VCX3BQ9H321 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.95■□□□□ 0.94
VCX3BQ9H321 AC087741.3-201ENST00000624270 1347 ntBASIC20.95■□□□□ 0.94
VCX3BQ9H321 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.95■□□□□ 0.94
VCX3BQ9H321 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
VCX3BQ9H321 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
VCX3BQ9H321 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L13-201ENST00000554103 1267 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L15-201ENST00000611059 1267 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L23-201ENST00000615195 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L24-201ENST00000617576 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L22-201ENST00000618238 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L20-201ENST00000619712 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L21-201ENST00000622058 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L10-201ENST00000622460 1267 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 DUX4L25-201ENST00000624915 1269 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.94■□□□□ 0.94
VCX3BQ9H321 AC138932.1-201ENST00000534164 6830 ntBASIC20.94■□□□□ 0.94
VCX3BQ9H321 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCX3BQ9H321 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.94■□□□□ 0.94
VCX3BQ9H321 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.93■□□□□ 0.94
VCX3BQ9H321 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VCX3BQ9H321 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
VCX3BQ9H321 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 HLA-V-202ENST00000446817 847 ntBASIC20.93■□□□□ 0.94
VCX3BQ9H321 AC010542.4-201ENST00000563151 1910 ntBASIC20.93■□□□□ 0.94
VCX3BQ9H321 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCX3BQ9H321 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCX3BQ9H321 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms