Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 BX842568.3-201ENST00000418104 571 ntBASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 AC105265.2-201ENST00000467189 838 ntBASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 AC008764.7-201ENST00000593779 1081 ntBASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 CA15P2-201ENST00000611168 834 ntBASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3KBP1Q96B97 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 AC233992.3-201ENST00000607491 485 ntBASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 AC068473.5-201ENST00000616428 2072 ntBASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3KBP1Q96B97 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3KBP1Q96B97 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 AC099791.1-201ENST00000416440 715 ntBASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 DUX4L4-201ENST00000566884 1269 ntBASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 ANOS2P-203ENST00000472227 1816 ntBASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3KBP1Q96B97 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3KBP1Q96B97 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3KBP1Q96B97 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.71■■□□□ 1.07
SH3KBP1Q96B97 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.71■■□□□ 1.07
SH3KBP1Q96B97 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.7■■□□□ 1.07
SH3KBP1Q96B97 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 AC144652.1-201ENST00000609974 1624 ntBASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 AL499627.2-201ENST00000606283 725 ntBASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 AC079630.1-202ENST00000618127 1840 ntBASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.7■■□□□ 1.06
SH3KBP1Q96B97 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 LINC01529-204ENST00000636474 1715 ntBASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SH3KBP1Q96B97 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms