Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 TPRG1LP1-201ENST00000598702 760 ntBASIC17.32■□□□□ 0.36
LINC01006Q8NI28 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
LINC01006Q8NI28 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 AC068587.7-201ENST00000641602 218 ntBASIC17.31■□□□□ 0.36
LINC01006Q8NI28 AC004687.1-201ENST00000579003 1625 ntBASIC17.31■□□□□ 0.36
LINC01006Q8NI28 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01006Q8NI28 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 KRT18P61-201ENST00000585825 1298 ntBASIC17.3■□□□□ 0.36
LINC01006Q8NI28 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 AC079630.1-202ENST00000618127 1840 ntBASIC17.3■□□□□ 0.36
LINC01006Q8NI28 SHD-204ENST00000599689 1729 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01006Q8NI28 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC016769.1-201ENST00000409132 1010 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC006015.1-201ENST00000429970 570 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC137761.2-201ENST00000561729 223 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC145350.3-201ENST00000569033 163 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC080038.1-201ENST00000611274 1154 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 BX005040.4-201ENST00000637145 1518 ntBASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
LINC01006Q8NI28 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LINC01006Q8NI28 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.27■□□□□ 0.36
LINC01006Q8NI28 AC087239.1-201ENST00000622671 572 ntBASIC17.27■□□□□ 0.36
LINC01006Q8NI28 AC020928.2-201ENST00000588717 2197 ntBASIC17.27■□□□□ 0.36
LINC01006Q8NI28 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01006Q8NI28 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 LINC00543-201ENST00000567234 1845 ntBASIC17.26■□□□□ 0.35
LINC01006Q8NI28 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01006Q8NI28 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms