Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 SVS1YPL163C 783 nt5.95□□□□□ -1.46
TY1A-MR1Q04215 ECM31YBR176W 939 nt5.95□□□□□ -1.46
TY1A-MR1Q04215 ARG81YML099C 2643 nt5.95□□□□□ -1.46
TY1A-MR1Q04215 TOS1YBR162C 1368 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 MSN4YKL062W 1893 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 HXT3YDR345C 1704 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 YDR415CYDR415C 1125 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 SUF5tG(CCC)O 72 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 APS1YLR170C 471 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 RPL15BYMR121C 615 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 SYC1YOR179C 567 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 ECM33YBR078W 1290 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 ADY3YDL239C 2373 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 GAL80YML051W 1308 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 UGO1YDR470C 1509 nt5.94□□□□□ -1.46
TY1A-MR1Q04215 YDR461C-AYDR461C-A 243 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)BtG(GCC)B 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SLD5YDR489W 885 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SUF16tG(GCC)C 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)D1tG(GCC)D1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)D2tG(GCC)D2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)EtG(GCC)E 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SUF20tG(GCC)F1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)F2tG(GCC)F2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)G1tG(GCC)G1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)G2tG(GCC)G2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)J1tG(GCC)J1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SUF23tG(GCC)J2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)MtG(GCC)M 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)O1tG(GCC)O1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SUF17tG(GCC)O2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)P1tG(GCC)P1 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tG(GCC)P2tG(GCC)P2 71 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 LIF1YGL090W 1266 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 YIL068W-AYIL068W-A 384 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 VPS51YKR020W 495 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 SRP40YKR092C 1221 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 YPT7YML001W 627 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 JLP2YMR132C 627 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 COX5AYNL052W 462 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 ATG8YBL078C 354 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 MAP2YBL091C 1266 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 BMT2YBR141C 1014 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 ALG9YNL219C 1668 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 PRM2YIL037C 1971 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 RPN4YDL020C 1596 nt5.93□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)B1tL(UAA)B1 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)B2tL(UAA)B2 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)DtL(UAA)D 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 SUP51tL(UAA)J 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)KtL(UAA)K 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)LtL(UAA)L 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 tL(UAA)NtL(UAA)N 84 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 YGL199CYGL199C 471 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 YJR087WYJR087W 351 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 YAL068W-AYAL068W-A 255 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 MRE11YMR224C 2079 nt5.92□□□□□ -1.46
TY1A-MR1Q04215 ISC1YER019W 1434 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 CDC1YDR182W 1476 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YDL183CYDL183C 963 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 ISC10YER180C 804 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YGR039WYGR039W 312 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YGR069WYGR069W 336 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 SOP4YJL192C 705 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 DPH5YLR172C 903 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YMR031W-AYMR031W-A 327 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YOL159CYOL159C 516 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YOR366WYOR366W 354 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 YPL088WYPL088W 1029 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 KNS1YLL019C 2214 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 SIR1YKR101W 1965 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 GGA1YDR358W 1674 nt5.91□□□□□ -1.46
TY1A-MR1Q04215 CDC19YAL038W 1503 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 SUC2YIL162W 1599 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 GYP1YOR070C 1914 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 BIM1YER016W 1035 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 TMT1YER175C 900 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 QCR6YFR033C 444 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 tM(CAU)Q1tM(CAU)Q1 76 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 GRE3YHR104W 984 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 RPS30AYLR287C-A 192 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 YLR463CYLR463C 552 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 BRX1YOL077C 876 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 CYC2YOR037W 1101 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 GRE1YPL223C 507 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 OPY1YBR129C 987 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 snR41snR41 95 nt5.9□□□□□ -1.46
TY1A-MR1Q04215 YFL002W-BYFL002W-B 1317 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 YGR161W-AYGR161W-A 1317 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 YBL100W-AYBL100W-A 1317 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 YCL020WYCL020W 1317 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 PAP2YOL115W 1755 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 IML2YJL082W 2196 nt5.9□□□□□ -1.47
TY1A-MR1Q04215 IME2YJL106W 1938 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 CNA1YLR433C 1662 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 UTP18YJL069C 1785 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 ATP8Q0080 147 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 YPT1YFL038C 621 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 YKL066WYKL066W 444 nt5.89□□□□□ -1.47
TY1A-MR1Q04215 UBX4YMR067C 1251 nt5.89□□□□□ -1.47
Retrieved 100 of 7,029 protein–RNA pairs in 24.1 ms