Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.6■□□□□ 0.73
CSNK1A1P48729 pRNA.6-201ENST00000610482 90 ntBASIC19.6■□□□□ 0.73
CSNK1A1P48729 pRNA.5-201ENST00000612139 90 ntBASIC19.6■□□□□ 0.73
CSNK1A1P48729 pRNA.11-201ENST00000618423 90 ntBASIC19.6■□□□□ 0.73
CSNK1A1P48729 pRNA.13-201ENST00000619112 90 ntBASIC19.6■□□□□ 0.73
CSNK1A1P48729 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.6■□□□□ 0.73
CSNK1A1P48729 AC004687.1-201ENST00000579003 1625 ntBASIC19.6■□□□□ 0.73
CSNK1A1P48729 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CSNK1A1P48729 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CSNK1A1P48729 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CSNK1A1P48729 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1A1P48729 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1A1P48729 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1A1P48729 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.59■□□□□ 0.73
CSNK1A1P48729 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1A1P48729 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.59■□□□□ 0.73
CSNK1A1P48729 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.59■□□□□ 0.73
CSNK1A1P48729 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CSNK1A1P48729 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CSNK1A1P48729 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.58■□□□□ 0.73
CSNK1A1P48729 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 AL136116.3-201ENST00000402907 1138 ntBASIC19.58■□□□□ 0.72
CSNK1A1P48729 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
CSNK1A1P48729 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CSNK1A1P48729 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.58■□□□□ 0.72
CSNK1A1P48729 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.58■□□□□ 0.72
CSNK1A1P48729 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CSNK1A1P48729 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.57■□□□□ 0.72
CSNK1A1P48729 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CSNK1A1P48729 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CSNK1A1P48729 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CSNK1A1P48729 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.57■□□□□ 0.72
CSNK1A1P48729 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CSNK1A1P48729 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1A1P48729 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.56■□□□□ 0.72
CSNK1A1P48729 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1A1P48729 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CSNK1A1P48729 AC133637.1-201ENST00000624115 1537 ntBASIC19.56■□□□□ 0.72
CSNK1A1P48729 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.56■□□□□ 0.72
CSNK1A1P48729 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 DUX4L19-201ENST00000557448 1267 ntBASIC19.55■□□□□ 0.72
CSNK1A1P48729 MIR3181-201ENST00000578512 73 ntBASIC19.55■□□□□ 0.72
CSNK1A1P48729 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 SYT6-210ENST00000641643 1587 ntBASIC19.55■□□□□ 0.72
CSNK1A1P48729 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.55■□□□□ 0.72
CSNK1A1P48729 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CSNK1A1P48729 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1A1P48729 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
CSNK1A1P48729 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CSNK1A1P48729 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1A1P48729 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1A1P48729 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1A1P48729 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.54■□□□□ 0.72
CSNK1A1P48729 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CSNK1A1P48729 ESRRAP2-201ENST00000418437 1549 ntBASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms