Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK1BO75841 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UPK1BO75841 LINC01006-201ENST00000333319 2292 ntBASIC19.28■□□□□ 0.68
UPK1BO75841 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.28■□□□□ 0.68
UPK1BO75841 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK1BO75841 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UPK1BO75841 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UPK1BO75841 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.28■□□□□ 0.68
UPK1BO75841 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
UPK1BO75841 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.27■□□□□ 0.68
UPK1BO75841 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
UPK1BO75841 SUZ12P1-203ENST00000578195 985 ntBASIC19.27■□□□□ 0.68
UPK1BO75841 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPK1BO75841 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPK1BO75841 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
UPK1BO75841 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.26■□□□□ 0.67
UPK1BO75841 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.26■□□□□ 0.67
UPK1BO75841 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
UPK1BO75841 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
UPK1BO75841 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPK1BO75841 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPK1BO75841 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK1BO75841 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
UPK1BO75841 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPK1BO75841 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
UPK1BO75841 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
UPK1BO75841 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.25■□□□□ 0.67
UPK1BO75841 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
UPK1BO75841 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
UPK1BO75841 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK1BO75841 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
UPK1BO75841 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK1BO75841 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPK1BO75841 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPK1BO75841 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
UPK1BO75841 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
UPK1BO75841 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
UPK1BO75841 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.23■□□□□ 0.67
UPK1BO75841 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.23■□□□□ 0.67
UPK1BO75841 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.23■□□□□ 0.67
UPK1BO75841 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.23■□□□□ 0.67
UPK1BO75841 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
UPK1BO75841 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.23■□□□□ 0.67
UPK1BO75841 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UPK1BO75841 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.22■□□□□ 0.67
UPK1BO75841 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.22■□□□□ 0.67
UPK1BO75841 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
UPK1BO75841 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
UPK1BO75841 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
UPK1BO75841 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UPK1BO75841 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
UPK1BO75841 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.21■□□□□ 0.67
UPK1BO75841 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UPK1BO75841 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UPK1BO75841 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.21■□□□□ 0.67
UPK1BO75841 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UPK1BO75841 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms