Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDF2Q99470 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.49■□□□□ 0.87
SDF2Q99470 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
SDF2Q99470 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.49■□□□□ 0.87
SDF2Q99470 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.49■□□□□ 0.87
SDF2Q99470 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SDF2Q99470 GUSBP5-202ENST00000510805 1989 ntBASIC20.48■□□□□ 0.87
SDF2Q99470 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.48■□□□□ 0.87
SDF2Q99470 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 AL356441.2-201ENST00000443009 864 ntBASIC20.48■□□□□ 0.87
SDF2Q99470 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SDF2Q99470 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SDF2Q99470 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.48■□□□□ 0.87
SDF2Q99470 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SDF2Q99470 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.47■□□□□ 0.87
SDF2Q99470 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SDF2Q99470 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SDF2Q99470 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.47■□□□□ 0.87
SDF2Q99470 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SDF2Q99470 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.47■□□□□ 0.87
SDF2Q99470 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.47■□□□□ 0.87
SDF2Q99470 AC079834.2-201ENST00000609776 1949 ntBASIC20.47■□□□□ 0.87
SDF2Q99470 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
SDF2Q99470 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
SDF2Q99470 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 AC241377.3-202ENST00000626088 1088 ntBASIC20.46■□□□□ 0.87
SDF2Q99470 AC241585.3-202ENST00000628937 1088 ntBASIC20.46■□□□□ 0.87
SDF2Q99470 AC245100.8-202ENST00000629247 1058 ntBASIC20.46■□□□□ 0.87
SDF2Q99470 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.46■□□□□ 0.87
SDF2Q99470 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SDF2Q99470 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SDF2Q99470 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SDF2Q99470 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SDF2Q99470 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 AC127496.7-201ENST00000625110 1798 ntBASIC20.45■□□□□ 0.86
SDF2Q99470 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.45■□□□□ 0.86
SDF2Q99470 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.45■□□□□ 0.86
SDF2Q99470 AL499627.2-201ENST00000606283 725 ntBASIC20.45■□□□□ 0.86
SDF2Q99470 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.45■□□□□ 0.86
SDF2Q99470 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SDF2Q99470 AC087742.1-201ENST00000575880 1738 ntBASIC20.44■□□□□ 0.86
SDF2Q99470 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SDF2Q99470 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.44■□□□□ 0.86
SDF2Q99470 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 AC004687.1-201ENST00000579003 1625 ntBASIC20.44■□□□□ 0.86
SDF2Q99470 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
SDF2Q99470 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SDF2Q99470 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SDF2Q99470 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SDF2Q99470 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SDF2Q99470 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDF2Q99470 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.43■□□□□ 0.86
SDF2Q99470 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SDF2Q99470 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SDF2Q99470 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.43■□□□□ 0.86
SDF2Q99470 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.43■□□□□ 0.86
SDF2Q99470 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.43■□□□□ 0.86
SDF2Q99470 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.43■□□□□ 0.86
SDF2Q99470 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDF2Q99470 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.43■□□□□ 0.86
SDF2Q99470 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDF2Q99470 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SDF2Q99470 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.43■□□□□ 0.86
SDF2Q99470 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SDF2Q99470 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms